Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0823 ATGGCtcatttccttttgtttgttttcgtGTTTGCTGGTCAACTGACTGTTGGGTTCAGTACCCAGAAACTACCTCCACCAGACTCTGGAGACACTATAAGCATTCTTAGCATTGATGGTGGTGGTATCAAGGGAATTATCCCAGCAAGAGTTCTTGATCACTTAGATACGGCTCTTAAGTCACAGGCTAAGGACCCAACTGCAACTCTAGCACATTATTTTGACGTGATAGCAGGGACTAGCACTGGTGGACTTATAGCAGCTATGTTAGCTAGCCCAAGCCCAGATGACCCTGATCGTCCTGGATTTACTCCTGCGGAAATCGTACAGTTCTACAAGGAATATGGCCCTTGTATATTCAATGAATCTAgACCTGGAATATGGAGCAAATTTGATGGGGAGTGCTTACATAACATAACTCGTGATCTATTGAAAGAAACACGACTAAATGAAACCTTGACAAATGTTGTAATCCCAACTTTCGACCTGTTGAAACAAAAGCCAGTTATATTCTCAAACTTAAGGTTAGCATACCTAAACACAGTTCCCTACTTAAATGCCAAGATGTCGGATATATGCATAGCGACTTCAGCTGCACCCACGCTTCTACCACCCCACTATTTTCAGAATGATGGTGTTGATTTCATTACGATTGATGGTGCTGTGGCTGCTAGTAATCCGGTAAATTTATTATAG 696 0.4095 MAHFLLFVFVFAGQLTVGFSTQKLPPPDSGDTISILSIDGGGIKGIIPARVLDHLDTALKSQAKDPTATLAHYFDVIAGTSTGGLIAAMLASPSPDDPDRPGFTPAEIVQFYKEYGPCIFNESRPGIWSKFDGECLHNITRDLLKETRLNETLTNVVIPTFDLLKQKPVIFSNLRLAYLNTVPYLNAKMSDICIATSAAPTLLPPHYFQNDGVDFITIDGAVAASNPVNLL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0823 231 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 231 IPR002641 GO:0006629
Ssu2g0823 231 PANTHER PATATIN 1 228 - -
Ssu2g0823 231 SUPERFAMILY FabD/lysophospholipase-like 34 229 IPR016035 -
Ssu2g0823 231 Pfam Patatin-like phospholipase 36 229 IPR002641 GO:0006629
Ssu2g0823 231 PANTHER XYLOSE ISOMERASE 1 228 - -
Ssu2g0823 231 Gene3D Cytosolic phospholipase A2 catalytic domain 25 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0823 Ssu-Chr2 42639603 42641355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0823 21 227 Acyl Lipid Metabolism Gene Families AT4G37070 46.429 4.00e-51 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0823 - - vun:114165690 318.931