Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu2g0774 | ATGGCTTCCTTTCCCTCCGCTCCTTCACCATCATCTCCTTCTTCAATTCCTTCTCCAAGATCTAGCATGTTTTACTATGCTGGAAGTGAAAACCACTATGAGGAGCCTCACTTCCTCCAAGCTTGTTTTCTTTGCAGAAAACCACTAGGCCAAAACCGTGACATCTTCATGTACAGAGGTAACACACCATTTTGTAGCAAAGAGTGCAGGCAGGAGCAAATAGAGATTGATGAGGCAAAGGAGAAAAGTTGGAAGCTTTCTTCCAAAAGGGATGTGAGACAATCAGAGACCAATCAAAATTCCACACCCAATAAGGCTGTAAGAACAGGCACAGTTGCAGTGGCCTAA | 348 | 0.4425 | MASFPSAPSPSSPSSIPSPRSSMFYYAGSENHYEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDEAKEKSWKLSSKRDVRQSETNQNSTPNKAVRTGTVAVA | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu2g0774 | 115 | PANTHER | FCS-LIKE ZINC FINGER 1-RELATED | 20 | 115 | IPR044533 | - | |
| Ssu2g0774 | 115 | MobiDBLite | consensus disorder prediction | 82 | 115 | - | - | |
| Ssu2g0774 | 115 | PANTHER | FCS-LIKE ZINC FINGER 3 | 20 | 115 | - | - | |
| Ssu2g0774 | 115 | Pfam | zinc-finger of the FCS-type, C2-C2 | 30 | 80 | IPR007650 | - | |
| Ssu2g0774 | 115 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Ssu2g0774 | 115 | MobiDBLite | consensus disorder prediction | 93 | 108 | - | - | |
| Ssu2g0774 | 115 | ProSiteProfiles | Zinc finger FLZ-type profile. | 37 | 81 | IPR007650 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu2g0774 | Ssu-Chr2 | 40917031 | 40917796 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu2g0774 | - | - | gmx:100499981 | 206.838 |