Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0770 ATGGCATCATCGGATGAAGAGGGTGAAATTCTCCCAGATCTTGTTAATAGTTAttggtttgaaaatgaaaaggaggAGTTTGTGTCATTTTCTAGTTTGACATTGTTGTGGAGCATTAGCAAGATCAAATGTGACTTGGAAGCAAAAGTATTTTTGCGTGGCACCACTGATGATGGCCTCCAGAAAATTCACAAACAGATCATGGGATGGAGATTTGAACTTCCCTATTGCCAGCCTCAGATTTCAGTGCTTTCAAAGGACAAAAACTGGATTACTCTCCAAAAACCAAGAAAGTGTTTTGAAAGTGCAATTAGGACAATCTTGGTCACAGTATATTGTTTGCATTTTGTGAAATGGAATCCAGAGGAATCTAGAAACTCTATTTGGAACAAAATGCAGAAGGACTTTAGCTCATTTGATGTTATGCCATCTGAGAATGATATTCTAAGTTATGTGACATTGATTAGAGAAGCTGTTAAAAGggataaagatttaaaaaaatgcaagTATCTGCTTGATTTCATGGAAAAGGCATGTTCAAATGGAAGCTTCCATGAGAACAGTGATGTTCATCctacaaagaaatcaaaatttattgtggACTCAGAGGATGAGGAGAATGAACAATCTGATGGTGAACTCAATCCCAATGGAGAACAAAATATTGGATATGATACCGTTTGTGCAATATGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGATGTCTGAGATCCTTCCATGCAACCAAAGAGGCTGGTATAGATGCATTTTGTGAATCTCTTGGCTACACTAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACtgcaaaaattgtaaatataagcAGCATCAGTGCTTTGCATGTGGCAAACTGGGTTCATCTGATGTATCATCTAAAGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTACTACCATCTTGAATGTGTTGCAAGGCTACTCTTCCCTGGCATTTACACTGAACAAGAGGAAATGAGAAAGAGAGTGGCCATTGGGAAAACATTTGTCTGTCCTCTTCATATATGTTCTTTAtgtaaaaaaggtgaaaataaaaatgttcatgATTTGCAGTTAGCAATGTGTAGATGCTGCCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCCTTCACGTTTGATTATGATAAGGGCATTGAGCAAAGGGCTTGGGATGGTCTACTTGACCATCgaattttgatatattgcaTGGATCATGAGATAGTTAGGGAACTTGGGACTCCTGCTAGACACCATCTTGTATTTCCTGATGTGAAAGTCAAAAGGaagatattcaattacaaattattaggCAAAGGAAAAGATACTATAAAATTGGGGCCAAGTTTTGAAGATCTTCCTCCAAAGAAAACATTGGTACCAAACCGGGTCATAGAGCAAAGTGTTAGCATCCAAGATGGTGGTTCTGCCAGAGATatggagaaaatatatttcaagaaaaatatacgTTTCTCAAGTGAATCAGTCAAGTTTGACATgaatagaaaatatttgaaggttaaaAAGGTGTCTGTGTTGAATAGTTCCTTACCAAGTCCTGCAAAAAAGTTGCCTTTGAAAAATGCTAACCTGCCCTGTAATTCAAGATTACGTGAAGCTAAATCTCTGCAGCAAAAATTGGTTGGTGGAAGAATTGGAAAAAAAGGCTTAGAGAAGCCTCTAGTAAAAACAATCCAAACTTCGCGTAACTTTAACAATGCTGATATGGAAAACAGTATTTTGTCTTTGATGAAAGAATCCATGTCTACATTTAATGAGGAAGAATTCAGAACGAACCATCAAGTCTTCTCTACAACTTCACGTTTCACTGAAACTGTATTTAATAAGAACCTTACTCAAGGAAAAGTAGAAGGTTCAATTAAGGCTATTCAAACAGCTTTGCAGAGGTTAGAGGAAGGATGTAGTATTGAAGAAGCAAAAGCTATTTGTGATACAGGGGTTCTTCATCAGCTTTTTACTTGGAAGAAGCAGCTCAAAGTCTATCTTGCACCTTTTCTTCATGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAAATGGACAAGTTGAAGGAGGTTGTTGATAGGCTTCATTGGTATGTTCAAAATGGTGACATGGTTTTAGACTTCTGTTGTGGTTCTAATGACTTCAGTTATCTAATGAAATCAAAGCTTGAACAGACGGGGAAGTTATGTTCATTTAAGAACTATGATTTATTCCAACCCAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCCAATGATTCTCAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTTAAGGGTTGTCTTGCTAACAAGTTTATTGACAAGGCATTGACATTTAAGCCAAAGCTCCTTATACTTATTGTGCCAAAAGTAACTAGACGACTTGACAGAAAGAAAGGTGGATATGATTTAATTTGGGAGGATGATCAGTTGTTTTCAGGAAAGTCATTTTATCTACCTGGTTCTGTTGATATACGCGACAAGCAATTGGAAGACTGGAACCTGAAGCCACCACCTCTGTACCTTTGGAGTCGTCCTGACTGGACCACTAAGCATAGGGAAATTGCTCAAAAGCATTGCCACATCAAGAAGAAATATGATGTGCATATGAAAGGAAAAGACGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTATCAGGATTACCTTGGCTTACATGCCCATGGGGATGTTTTGAGCATATTTGATGATGTTCCAGATGATAACAGTGACAATGCTCCCGAGGAAGGTCCAACTAGCCATGCTCTGGGTCAGTTGAAGGAGACAATGCTTTCTGATTGTGGAAGAGAAATGAAATTGGAGGATGGGTTACCCTCTGATGAAGCTGAGGAAATGTGTATTGATATGGACTTATCATCTCCCTAG 2970 0.3606 MASSDEEGEILPDLVNSYWFENEKEEFVSFSSLTLLWSISKIKCDLEAKVFLRGTTDDGLQKIHKQIMGWRFELPYCQPQISVLSKDKNWITLQKPRKCFESAIRTILVTVYCLHFVKWNPEESRNSIWNKMQKDFSSFDVMPSENDILSYVTLIREAVKRDKDLKKCKYLLDFMEKACSNGSFHENSDVHPTKKSKFIVDSEDEENEQSDGELNPNGEQNIGYDTVCAICDNGGEILPCEGRCLRSFHATKEAGIDAFCESLGYTSAQVKAFPNFYCKNCKYKQHQCFACGKLGSSDVSSKAEVFPCVTANCGHYYHLECVARLLFPGIYTEQEEMRKRVAIGKTFVCPLHICSLCKKGENKNVHDLQLAMCRCCPKAYHRKCLPKEISFTFDYDKGIEQRAWDGLLDHRILIYCMDHEIVRELGTPARHHLVFPDVKVKRKIFNYKLLGKGKDTIKLGPSFEDLPPKKTLVPNRVIEQSVSIQDGGSARDMEKIYFKKNIRFSSESVKFDMNRKYLKVKKVSVLNSSLPSPAKKLPLKNANLPCNSRLREAKSLQQKLVGGRIGKKGLEKPLVKTIQTSRNFNNADMENSILSLMKESMSTFNEEEFRTNHQVFSTTSRFTETVFNKNLTQGKVEGSIKAIQTALQRLEEGCSIEEAKAICDTGVLHQLFTWKKQLKVYLAPFLHGMRYTSFGRHFTKMDKLKEVVDRLHWYVQNGDMVLDFCCGSNDFSYLMKSKLEQTGKLCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPNDSQLIIGLNPPFGVKGCLANKFIDKALTFKPKLLILIVPKVTRRLDRKKGGYDLIWEDDQLFSGKSFYLPGSVDIRDKQLEDWNLKPPPLYLWSRPDWTTKHREIAQKHCHIKKKYDVHMKGKDVKNYLMEENHDCYQDYLGLHAHGDVLSIFDDVPDDNSDNAPEEGPTSHALGQLKETMLSDCGREMKLEDGLPSDEAEEMCIDMDLSSP 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0770 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 393 IPR013083 -
Ssu2g0770 989 MobiDBLite consensus disorder prediction 967 989 - -
Ssu2g0770 989 PANTHER EDM2-LIKE PROTEIN1 1 930 - -
Ssu2g0770 989 SMART PHD_3 354 420 IPR001965 -
Ssu2g0770 989 SMART PHD_3 227 282 IPR001965 -
Ssu2g0770 989 SMART PHD_3 287 353 IPR001965 -
Ssu2g0770 989 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 930 - -
Ssu2g0770 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 283 IPR013083 -
Ssu2g0770 989 CDD PHD2_NSD 287 352 - -
Ssu2g0770 989 MobiDBLite consensus disorder prediction 933 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0770 Ssu-Chr2 40805668 40817283 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0770 - - cam:101512524 1400.57