Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0758 ATGAAACTGGGAAGTGTGTTGTGTGAGTTATTATCAGAAGCCCTTGAGCTGAATCCAAACCATTTGAATGACATTGGTTGCAATGAGGGACTTGTGGTTGTTTGCCATTGCTACCCTGCCTATCCAGAACCAGAATCGACTTTGGGTGCAACCAAGCATACTGATAATGACTTCATCACCGTGCTTCTACAAGATCATATTGGGGGCCTCCAAGTTCTTCACAAAAACAGGTGGGTGGATGTGTCCCCTGTACCAGGTGCTCTAGTAATCAACATTGGTGATCTTCTTCAGCTTATAACAAATGATAGATTCAAGAGTGCTGAGCACAGAGTTCTTGCAAATCATGTTGGTCCAAGAATATCTATTGCATGCTTTTTTCGCCCAGGTGGGAAGGCATCCTTAAAGCTTTATGGACCTTTGAAGGAACTATTATCAGAAGACAATCCTCCCAAATACAGGGAAACTACTATTGTTGACTATGAAGCCTACTATATTGCAAAAGGTCTAGATGGCACTAGTGCTCTTGCACATTACAAGATTTGA 543 0.4217 MKLGSVLCELLSEALELNPNHLNDIGCNEGLVVVCHCYPAYPEPESTLGATKHTDNDFITVLLQDHIGGLQVLHKNRWVDVSPVPGALVINIGDLLQLITNDRFKSAEHRVLANHVGPRISIACFFRPGGKASLKLYGPLKELLSEDNPPKYRETTIVDYEAYYIAKGLDGTSALAHYKI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0758 180 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE PROTEIN 1 178 - -
Ssu2g0758 180 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 27 128 IPR005123 -
Ssu2g0758 180 SUPERFAMILY Clavaminate synthase-like 2 171 - -
Ssu2g0758 180 Pfam 2OG-Fe(II) oxygenase superfamily 29 128 IPR044861 -
Ssu2g0758 180 Gene3D - 1 163 IPR027443 -
Ssu2g0758 180 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0758 Ssu-Chr2 40517180 40574830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0758 1 180 Glycosyltransferase AT5G59530 58.889 4.28e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0758 - - gmx:100777564 300.056