Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0748 ATGGAGAGCTTGATCGGCTTGGTGAACAGAATCCAGCAGGCCTGCACCGTGCTCGGTGACTACGGCGGCAACGACAACAACGCTTTCTCTTCTCTCTGGGAAGCTCTTCCTTCCGTCGCCGTCGTCGGCGGCCagAGTTCGGGTAAATCTTCGGTTTTGGAAAGCATCGTTGGACGTGACTTTCTTCCCAGAGGATCAGGGATTGTGACGAGGCGTCCATTGGTGTTGCAGCTTCATAAGGTTGACGGTGAAGCGAAGGAGTATGCTGAGTTTCTTCACATGCCAGGGAGGAAGATAACCGATTATGCCTTCGTCCGCCAGGAAATTCAGAATGAAACTGATAGAGTAACGGGAAGGGGAAAACAAATATCTCCTGTTCCAATTCATCTTAGCATTTATTCTCCATATGTTGTCAACCTAACTTTGATTGATTTACCTGGATTGACTAAAGTTGCTGTAGAGGGACAGCCTGAGACTATTGTTCAAGACATTGAAAATATGGTTCGATCTTATGTTGAGAagCCTAATTGTATTATACTGGCGATATCTCCAGCCAACCAAGACATAGCTACTTCTGATGCTATTAAACTTTCAAGGGAGGTGGATCCCGCAGGTGAGAGGACATTCGGAGTGTTGACAAAGCTGGATTTAATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGCAGATCTTACCGTCTGCAACATCCCTGGGTTGGTATAGTAAATCGATCCCAAGCAgatatcaataaaaatgttgatatgATTGTTGCTAGACGTAAGGAGCGTGAGTATTTTGAAAGCAGTCCTGACTATGGGCACTTAGCCAATAAAATGGGTTCCGAATACCTTGCAAAACTTCTCTCACAGCATTTGGAGTCAGTAATTAGGACGCGGATACCTAATATAACATCTTCAATAAACAAAACCATTGAAGAACTTGAATCAGAGATGGATCATCTGGGGAGACCAATTGCTGTTGATGCTGGGGCTCAACTATACACTATCCTAGAACTTTGCCGCGCATTTGATCGGATATTCAAGGAACATTTAGATGGAGGGCGGCCAGGAGGAGATAGGATATATAATGTCTTTGACAATCAGCTTCCTGCTGCTTTACGGAAGCTTCCATTTGACCGACATCTATCTCTTCAAAATGTAAGGAAAGTGGTATCAGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCTAGGTTACCGGCGCCTGATTGAGGGAGCTCTCAGCTACTTTAGGGGCCCCGCCGAAGCTTCAGTTGATGCAGTTCACTCTGTCTTAAAAGAACTTGTGAGGAAATCAATAGCTGAAACTAAGgAATTGAGACGTTTCCCAACTCTTCAAGCCGAAATAGCTGCAGCTACAAATGAGGCTTTAGAGAGGTTCCGTGAAGAGAGTAAGAAGACAGCTATTCGACTTGTGGATATGGAAGCTTCGTAtctaactgtggagttcttccGTAGACTTCCTCAAGAAATGGAGAAAGCTGGAAATCCAGCTAATCAAGCTACCCCAAATGTGGATCGCTATGGAGAAGGGCATTACAGGAGGATTGGATCAAATGTATCTTCCTATATCGGTATGGTATCAGACACTCTCAGGAACACTATTCCAAAGGCTGTGGTTTATTGTCAGGTCAGAGAAGCAAAACTGTCATTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGCGGCTAAACAGCTATCACATTTGTTAGATGAAGACCCTGCCTTGATGGAGAGGAGGCAACAATGTGCTAAAAGGCTTGAACTACATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCTTGGGCACGATGA 1848 0.4356 MESLIGLVNRIQQACTVLGDYGGNDNNAFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKVDGEAKEYAEFLHMPGRKITDYAFVRQEIQNETDRVTGRGKQISPVPIHLSIYSPYVVNLTLIDLPGLTKVAVEGQPETIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSREVDPAGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFESSPDYGHLANKMGSEYLAKLLSQHLESVIRTRIPNITSSINKTIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPELGYRRLIEGALSYFRGPAEASVDAVHSVLKELVRKSIAETKELRRFPTLQAEIAAATNEALERFREESKKTAIRLVDMEASYLTVEFFRRLPQEMEKAGNPANQATPNVDRYGEGHYRRIGSNVSSYIGMVSDTLRNTIPKAVVYCQVREAKLSLLNHFYTQIGKKAAKQLSHLLDEDPALMERRQQCAKRLELHKAARDEIDSVSWAR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0748 615 PANTHER DYNAMIN 1E-LIKE PROTEIN 2 614 - -
Ssu2g0748 615 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Ssu2g0748 615 CDD DLP_1 36 302 IPR001401 GO:0003924|GO:0005525
Ssu2g0748 615 PANTHER DYNAMIN 2 614 IPR022812 -
Ssu2g0748 615 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 33 302 IPR030381 GO:0005525
Ssu2g0748 615 Gene3D - 1 311 IPR027417 -
Ssu2g0748 615 Pfam Dynamin GTPase effector domain 520 611 IPR003130 GO:0003924|GO:0005525
Ssu2g0748 615 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 62 71 IPR019762 -
Ssu2g0748 615 Pfam Dynamin family 39 214 IPR045063 -
Ssu2g0748 615 PRINTS Dynamin signature 184 202 IPR022812 -
Ssu2g0748 615 PRINTS Dynamin signature 203 219 IPR022812 -
Ssu2g0748 615 PRINTS Dynamin signature 61 78 IPR022812 -
Ssu2g0748 615 PRINTS Dynamin signature 134 151 IPR022812 -
Ssu2g0748 615 PRINTS Dynamin signature 36 54 IPR022812 -
Ssu2g0748 615 PRINTS Dynamin signature 226 245 IPR022812 -
Ssu2g0748 615 ProSiteProfiles GED domain profile. 523 615 IPR020850 -
Ssu2g0748 615 Gene3D Dynamin, middle domain 328 581 - -
Ssu2g0748 615 SMART dynamin_3 1 253 IPR001401 GO:0003924|GO:0005525
Ssu2g0748 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 310 IPR027417 -
Ssu2g0748 615 Pfam Dynamin central region 223 490 IPR000375 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0748 Ssu-Chr2 40007121 40013419 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0748 - - gmx:100790977 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0748 2 40007121 40013419 Ssu2g0748 2 40007121 40013419 ECH