Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0747 ATGTTTTTCCTTCATTGGACAATGTTGGTACTATGTCCAgcaaaatatagtttttttttcccgGATGCAAATGGAAGCATCCTAGAGAAAAATCCTACAGTTGTTTTTGTGTTAGGTGGCCCAGGCAGTGGAAAGGGCACCCAATGTGCAAATATTGTCCAAAATTTTGGATATACTCACCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATgattaaagaaggaaaaattgttCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCGGCATTCGTACTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAATAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTCCCCgtgattaattattatgatgCAAAGGGAAAAGTTCGCAAGGTAATTGATAGTTGTGCTTCTACCATATCTTTGGTAAATTTCTTGGTTGCCTCTGGTACTAAGGACATcacataa 654 0.3654 MFFLHWTMLVLCPAKYSFFFPDANGSILEKNPTVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLNRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKVIDSCASTISLVNFLVASGTKDIT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0747 217 PANTHER UMP-CMP KINASE 23 193 - -
Ssu2g0747 217 Gene3D - 22 203 IPR027417 -
Ssu2g0747 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 187 IPR027417 -
Ssu2g0747 217 PANTHER NUCLEOTIDE KINASE 23 193 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 34 194 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Ssu2g0747 217 Hamap Adenylate kinase [adk]. 33 206 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 CDD ADK 34 194 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 Pfam Adenylate kinase 37 189 - -
Ssu2g0747 217 ProSitePatterns Adenylate kinase signature. 112 123 IPR033690 -
Ssu2g0747 217 Hamap UMP-CMP kinase [CMPK1]. 32 214 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Ssu2g0747 217 PRINTS Adenylate kinase signature 112 128 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 PRINTS Adenylate kinase signature 36 49 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 PRINTS Adenylate kinase signature 176 190 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 PRINTS Adenylate kinase signature 159 174 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu2g0747 217 PRINTS Adenylate kinase signature 64 78 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0747 Ssu-Chr2 39985932 39992387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0747 K13800 - gmx:100306603 337.421