Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0743 ATGCCATTTTATGACTACATCTATGGCACCATGGACAAGGCTTCTGATAAACTACATGAGTCAGCATTAAAACGAGAGGAAGAAATTCCAGATGTTGTGCACCTAACGCATCTCACCACCCCTGAATCCATCTATCATCTCAGGCTTGGATTTGCTTACTTAGCCTCTAAGCCTTACATGTCAAAATGGTACTTTTGTTTGATGTGGCCCGTGACAGCTTGGTCCATGATCCTCACATGGGTCTATGGTCGTACGTTCATTGTGGAGGGAAACCGTTTTGACAAACTCAAGCTGCAAACTTGGGCAATACCCAAGTACAGTCTCCAATACTTCTTGCAATCACAAAAGGTGGCTATCAACACAATGATAGAAGAAGCAATACTCGATGCTGACAGAAAAGGCATAAAAGTGCTGAGCTTAGGCCTAAGGAATCAAGGAGAGGACCTTAACATCTATGGAAGGCTATATGTTAGTAGGCATCCAAAGCTAAAAGTTAAGATTGTAGATGGAAGTAGCCTTGTAGTTGCTGTTGTTCTTAACAGCATTGCCAAAGGAACAACTCAAGTGTTACTTAGGGGCAAACTCACCAAGGTTGCTTATGCTCTTGCCTTCACATTGTGTCAACAAGGTGTTCAGGTTGCTACAATGCACGAGGATGATTATGAGAGACTCAAAAAGTCATTCAATAGCTCTGACACTAATTTGGCCTTTACCAAAAGCAACACACAGACgACTTGGTTAGTAGGAGATGGATTGACTGAAGAGGAACAACTGAAGGCACCCAAAGGAACATTATTTATTCCATACACACAATTTCCACCAAGGAAATATCGCAAGGATTGCTCCTACCATTGCACCCCAGCAATGTTGGCTCCttcttctattgaaaatgtccATTCTTGTGAGGATTGGCTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATAGTGCACTCTCTAGAAGGATGGAGTGAACATGAGTGTGGCCACACAATGCATAACATAGACAAAGTTTGGCATTCAGCTCTTCAACATGGGTTCCAACCACTTTCGGTGCCGGTTAAAGAGTTAGCTCATTATAAATGA 1092 0.424 MPFYDYIYGTMDKASDKLHESALKREEEIPDVVHLTHLTTPESIYHLRLGFAYLASKPYMSKWYFCLMWPVTAWSMILTWVYGRTFIVEGNRFDKLKLQTWAIPKYSLQYFLQSQKVAINTMIEEAILDADRKGIKVLSLGLRNQGEDLNIYGRLYVSRHPKLKVKIVDGSSLVVAVVLNSIAKGTTQVLLRGKLTKVAYALAFTLCQQGVQVATMHEDDYERLKKSFNSSDTNLAFTKSNTQTTWLVGDGLTEEEQLKAPKGTLFIPYTQFPPRKYRKDCSYHCTPAMLAPSSIENVHSCEDWLPRRVMSAWRIAGIVHSLEGWSEHECGHTMHNIDKVWHSALQHGFQPLSVPVKELAHYK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0743 363 Pfam WAX2 C-terminal domain 189 351 IPR021940 -
Ssu2g0743 363 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 355 - -
Ssu2g0743 363 PANTHER STEROL DESATURASE 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0743 Ssu-Chr2 39867999 39870922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0743 1 355 Acyl Lipid Metabolism Gene Families AT1G02205 56.233 7.71e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0743 K15404 - gmx:100818020 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0743 2 39867999 39870922 Ssu2g0743 2 39867999 39870922 ECH