Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0741 ATGACCATCAAAAAAATGATAGAGGAAGCAATACTAGATGCAGACAGAAAAGGCATAAAAGTGCTGAGCCTAGGCCTTATGAATCAAGGACAGGAGCTTAACATCTATGGAGGGTTATATGTTAGCAGGCATCCTAAGTTAAAAGTTAAGGTTGTAGATGGAAGCAGCCTTGCAGTTGCTGTTGTTCTTAACAGCATTCCTAAAGGAACAACTCAAGTATTACTTAGGGGTAAGCTCACCAAGGTTGCTTATGCTCTTGCCTTCACATTGTGTCAACAAGGCATCAagGTTGCTACAATTCATAAGGATGATTATATGAAGCtcaaaaattcattcaataacTCTGAAACTAATTTGATCATTGCAAATAACTACACCCAGATGacttgGTTAGTTGGAGACGAATTGACTGAAGAAGAACAACTGAAGGCATCCAAAGGAACATTATTTATTCCATACTCGCAATTCCCACCAAGGAAATACCGCAAGGATTGCTTCTACCATTGTACCCCAGCAATGCTAATTCCTAGTCGTGTTGAAAATGTTCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGTATAGTGCACTCTTTAGAAGGATGGAGTGAACATGACTGCAGCTATACAATGCATAACATAGACAAAGTTTGGTGTTCAACTCTTCAACATGGATTCCAACCTCTTACGGTGCCGATCAAAGAATCAGAACTTTGCAATTGCTTCCCTTGCTTCTGGGCTTTGGTTCTGGGTTTTTTCGAACAGGGGAAGAGGACTAGTGGGCTACCATCCAAAATGACTTCTATTGCGAAGGTTAAATGA 843 0.3998 MTIKKMIEEAILDADRKGIKVLSLGLMNQGQELNIYGGLYVSRHPKLKVKVVDGSSLAVAVVLNSIPKGTTQVLLRGKLTKVAYALAFTLCQQGIKVATIHKDDYMKLKNSFNNSETNLIIANNYTQMTWLVGDELTEEEQLKASKGTLFIPYSQFPPRKYRKDCFYHCTPAMLIPSRVENVHSCEDWLPRRVMSAWRIAGIVHSLEGWSEHDCSYTMHNIDKVWCSTLQHGFQPLTVPIKESELCNCFPCFWALVLGFFEQGKRTSGLPSKMTSIAKVK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0741 280 Pfam WAX2 C-terminal domain 73 235 IPR021940 -
Ssu2g0741 280 PANTHER STEROL DESATURASE 1 239 - -
Ssu2g0741 280 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0741 Ssu-Chr2 39838895 39841665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0741 3 243 Lipid Metabolism Gene Families AT2G37700 56.735 2.81e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0741 K15404 - gmx:100818020 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0741 2 39838895 39841665 Ssu2g0741 2 39838895 39841665 ECH