Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0727 ATGAATGCGTGCGGACGAAATCAAATTGTTCCCTTTTTTATTCCTCAACTTAGCCGCTCTGCCAGCCCACTGTATGGATATGGAGTGGCCAAGGTTGTGGATTCTGGGCACCCGGATTTTGAAGAAGGTGACTTTGTCTGGGGAATAACTGGATGGGAAGAGTACACTATCATCACGTCATTTGAACACTTGTTCAAAATCCAGCACACTGATGTCCCTCTGTCCTATTATACAGGGATCCTTGGTATGCCTGGTTTAACTGCTTATGCGGGATTCTTTGAGGTGTGTGATCCAAAGAAGGGGGAAAATGTCTTCGTTCCCGCGGCAGCTGGTGGCGTTGGTCAACTTGTGGGCCAATTTGCAAAACTCATGGGTTGCTATGTTGTGGGAAGTGCTGGAAGTAAAGAAAAGGTTGATCTACTGAAGAATAAATTTGGGTTTGACGAAGCTTTCAATTATAAGGAAGAACATGATTTGGATGCAGCCTTGAAAAGGTATTTTCCTCAAggaattgacatatatttcgaTCTTGTGGGAGGCAAAATGTTAGATGCGGCTCTTGTGAACATACGAGTCCATGGTCGAATTGCAATGTGTGGACTGATCTCTCAGGTCACTCTGGAGGAGCGTGAAGGGGTGAAAAACACAAGGTGTCTTATTTATAAGAGAATTCGCATGCAAGGGTTGAATGTGGTTGACTATTATCATCTCTATCCCAAATTCTTGGACCTTTTGATGCCTCAAATAAGGCAAGGGAAGATATCATGCTTGGAAGACATAGTTGAGGGACTTGAGAATGGGCCAAATGCCTTGATTAGAGTTTTCAGTGGTCACAACATTGGAAAACAAGTAGTTTCACTTGCCAATGAGTAa 873 0.4273 MNACGRNQIVPFFIPQLSRSASPLYGYGVAKVVDSGHPDFEEGDFVWGITGWEEYTIITSFEHLFKIQHTDVPLSYYTGILGMPGLTAYAGFFEVCDPKKGENVFVPAAAGGVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEHDLDAALKRYFPQGIDIYFDLVGGKMLDAALVNIRVHGRIAMCGLISQVTLEEREGVKNTRCLIYKRIRMQGLNVVDYYHLYPKFLDLLMPQIRQGKISCLEDIVEGLENGPNALIRVFSGHNIGKQVVSLANE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0727 290 Gene3D - 21 285 - -
Ssu2g0727 290 SUPERFAMILY GroES-like 22 96 IPR011032 -
Ssu2g0727 290 Pfam Zinc-binding dehydrogenase 112 245 IPR013149 -
Ssu2g0727 290 SMART PKS_ER_names_mod 5 285 IPR020843 GO:0016491
Ssu2g0727 290 Pfam N-terminal domain of oxidoreductase 22 60 IPR041694 -
Ssu2g0727 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 250 IPR036291 -
Ssu2g0727 290 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 19 289 - -
Ssu2g0727 290 Gene3D - 80 256 - -
Ssu2g0727 290 PANTHER PROSTAGLANDIN REDUCTASE 19 289 IPR045010 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0727 Ssu-Chr2 39456610 39463649 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0727 K19825 - gmx:100813407 497.278