Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0715 ATGTGTTCGCAGCAGCAGCAAATGCAAAACAGTGGCAGCAGCAGCGGCAGCGGCAGCGGCAGCATCCCAGTGAGTGAGGTGTTCTGGACTCTCGTCGATAAAGCCGACAAGAAGTTCTCCAAAATCAGAGACCTTCCTTTCTACCAACGCAGCAGGCATGATACGTACTTTTATAAGGTGTTCAAGGTGTACACACAATTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTGGTTGAAGCTGGGCTTAGGAGGTGGGAGATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCGCACAAGTGATGCAAATTATCTATCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAATATTTTAAGGAGGGGTTGTTTCAGGACGTGAGTATTGCAAACAAACAATTGAGGTTTCTCGCTAGATTCATAATGGTGTGTTTGGTTTTGAACAGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAACGTTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAGGAAATAGTCAGATTTTTGAAAGCTGACACTGCTTTTATGAATCTCAGGCCCTTAAGATACAGTCTAGTTTTGGACCCTCATCCTGATACTTTACCACATGTTGCTGCAGCCATTACAAAGCGACATTTGAAACTTCGAGATGCTGTATTAAGTAGCTTCCATCAAAATGAGGTAAAGTATTCAGAGCTCACAATTGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTATTGGGTCAAAGCTTAGTCAGAATGGGGTTACTGGGACTAGTCGTATCAGTTACATCCAAGACATTGCTGATCCTACCTTACCAGCTAACCCACGAAAAGCTGTGTTATACCGTCCTTCACTGACACATTTTATAGCTGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGTATTCTCCTGGTGTATTTGTCAGCTTCAGGATCTTATGGTGCTGCACAGAATGAATCTGGTTGCATACACTTTGGTCCTCGTGGAGATAGAGGATCAAACTGCATACATCCATCTGACTTTCTACCGTTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGACAACAGCAAAGCTTTTAAGGTCATAGcagaagaagaaaagggagaGTCAGTTGCTATGCTCCTTTCTCCAAGTTGTTCACCTGCTGTGTCTGATTGCTCACATAATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCGCTGCAAGCTTTCTGTCTGCTGCTAGGACTTTCAGGCACTGATATTGATTTGGACGCATTCAACAAAGCTGAAATGCTGCTCTCATCTTCGTTAAATAACTGGGGACTGGCATTGGCAACATCAGACACACTTAATCCTGTTTGGGGACAGATGTTAGGTGATCCGTTCATAAGGAGACTTCTTTTGAGATTCATATTTTGCCAGGCAGTGTTGTCCCTATATGGACCAGTTTGCAATGAAAACAAATTCCTTCCAACATGTGTCCCTTCTCTTCCGACACCTGTCCTTCCCCAAAGTTACTCATATCCGAGTGTAATTCTGAATTTAGCCAGCATGTTTGGTGCAACTAAGCATTTCATCATCTCAGAGGATGTTCTTCCTGAAAATATACAAACCGACATGAATCAGTTAACTCTATGA 1740 0.4236 MCSQQQQMQNSGSSSGSGSGSIPVSEVFWTLVDKADKKFSKIRDLPFYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMRTSDANYLSESYIFYEAILTREYFKEGLFQDVSIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVVQEIVRFLKADTAFMNLRPLRYSLVLDPHPDTLPHVAAAITKRHLKLRDAVLSSFHQNEVKYSELTIDTFRMLQCLEWEPSGSFYQSIGSKLSQNGVTGTSRISYIQDIADPTLPANPRKAVLYRPSLTHFIAVLATICEELPSDGILLVYLSASGSYGAAQNESGCIHFGPRGDRGSNCIHPSDFLPFTRRPLLLVIDNDNSKAFKVIAEEEKGESVAMLLSPSCSPAVSDCSHNSNGSLFTMFLTAPLQAFCLLLGLSGTDIDLDAFNKAEMLLSSSLNNWGLALATSDTLNPVWGQMLGDPFIRRLLLRFIFCQAVLSLYGPVCNENKFLPTCVPSLPTPVLPQSYSYPSVILNLASMFGATKHFIISEDVLPENIQTDMNQLTL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0715 579 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 352 572 - -
Ssu2g0715 579 Pfam Protein SCAI 31 354 IPR022709 GO:0003714|GO:0006351
Ssu2g0715 579 Pfam Protein SCAI 356 514 IPR022709 GO:0003714|GO:0006351
Ssu2g0715 579 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 7 352 - -
Ssu2g0715 579 PANTHER PROTEIN SCAI 7 352 - -
Ssu2g0715 579 PANTHER PROTEIN SCAI 352 572 - -
Ssu2g0715 579 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0715 Ssu-Chr2 38842362 38867310 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0715 - - gmx:100810202 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0715 2 38842362 38867310 Ssu2g0715 2 38842362 38867310 ECH