Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0705 ATGGCCCTTCAAGCTTTTCATGGTTCTGCATGTTGTTTCCATTCCCACCCtcactcttcttcttcttccagcACTGCATCTCCACCATTCCCTGCTTCAAGGAGGTTCCCATCATGTCCTTCGACAAGGAAATCTCTCAAGTTGAACTGCAGTTCAAGTGGCAACAATGGTGACCAAGATTACCTTCTGGATGCTCCAGTTTCTGTTGGAGATGGATTCTCTTTCAGTGGAGTTTCTTCTATTCTGACAGGAAAGTATTCAGATGGGCCTGGTCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTGAGGCCTATTCAATTCCTGGCACTGGTGAAAGGGCAAAAGATCCAATTTTTGGACTTGCTATGGGTGCTGGTTCCCAAGCTACTGGTGATCGTTTCAGATGGTTTTGTGTTGAAAGCGGAAGTGCTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCAGTACTCTCCAAGGACTATCATGCCATAGCATTTGACTGGCTAGGATTTGGGTTTTCTGAGAAGCCTCAACCCAGATATGGGTTTGACTACACACTGAATGAATATGTGTCATCATTGAAGTCACTTATTGATGAACTGGCTGTTACTATAGTCTCACTTGTTGTCCAGGGATATGTTTCGCCTGTTGTAGTTAAGTATGCCAGCATTCACCAAGAAAAGCTCAGCAACTTAATACTCCTTAATCCACCTCTAACAGCCCAACATGCCAAGCTTCCGCCAACACTGTCCATATTCGGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCTCTAACAAGCTGTGGCCCctataaaatgaaagaagaagaTGCAATGGTCTATAGAAGACCCTATCTTACATCCGGTTCCTCAGGCTTTGCACTCAATGCTATTAGTAGGAACATGAAGAAAGATCTCAAGAGTTATGTGAAGGATATGCACACAATACTTAAGGACAATAATTGGAAAGTTCAAACCACAATATGTCGTGGCCAAAGAGACCGCTGGTTGAGCTATGATGGAGTGGAGGATTTCTGCAAGGATTCCAACCATAAACTCATTGAAGTTCCTAGGGTAAATACATTAGATTCATTTGCACTTGCTTGA 1173 0.416 MALQAFHGSACCFHSHPHSSSSSSTASPPFPASRRFPSCPSTRKSLKLNCSSSGNNGDQDYLLDAPVSVGDGFSFSGVSSILTGKYSDGPGPSDEWFKQGKMVEAYSIPGTGERAKDPIFGLAMGAGSQATGDRFRWFCVESGSADNPSVILIHGFPSQAYSYRKVLPVLSKDYHAIAFDWLGFGFSEKPQPRYGFDYTLNEYVSSLKSLIDELAVTIVSLVVQGYVSPVVVKYASIHQEKLSNLILLNPPLTAQHAKLPPTLSIFGNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNAISRNMKKDLKSYVKDMHTILKDNNWKVQTTICRGQRDRWLSYDGVEDFCKDSNHKLIEVPRVNTLDSFALA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0705 390 PANTHER EPOXIDE HYDROLASE 52 380 - -
Ssu2g0705 390 Pfam alpha/beta hydrolase fold 148 253 IPR000073 -
Ssu2g0705 390 SUPERFAMILY alpha/beta-Hydrolases 131 378 IPR029058 -
Ssu2g0705 390 MobiDBLite consensus disorder prediction 21 43 - -
Ssu2g0705 390 PANTHER HYDROLASE-LIKE 52 380 - -
Ssu2g0705 390 Gene3D alpha/beta hydrolase 127 382 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0705 Ssu-Chr2 38471346 38478053 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0705 141 279 Acyl Lipid Metabolism Gene Families AT3G05600 27.564 1.55e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0705 - - gmx:100809126 670.618