Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0702 ATGGCACCAACAATCCCCTCAGATCTCACTGAATTTGTGATGCTTCAAGGGAATGGAGTAAAGGGCCTCTCTGAAATGGGCCTAAAGAGCCTCCCTAGTCAGTATATCCAACCTTTGGAAGAGAGGATGAGTATGATCAATGTTGTGCCTCAAGAATCCATTCCCATCATTGACATGTCCAACTGGGATGATCCAAAAGTGGAAGATGCAATTTGTGATGCAGCTGAGAAGTGGGGCTTCTTCCAAATAATCAATCATGGGGTGCCCCTTCAAGTGTTGGACGATGTTAAGGAAGCAACTTATAGGTTTTATTGGCTGCCACCTGTGGAGAAGGTTAAGTACACAAAAGAGAATTCTCCATCCAAGCATGTGAGGTATGGATCTAGCTTTAGCCCTGAAGCAGAGAAGGCCCTAGAGTGGAAAGATTATCTAAGCCTCTTCTATGTTTCAGAGGATGAGGCTGTAACAATGTGGCCCCCCGCATGCAGGGATGAAGCATTAGAATACATGAAGAGATCTGAAATCGTGATCAAACGACTTTTAAATGCATTAATGAAGAGGCTAAATGTGAGGAAAATTGATGAGACAAATGAATCACTATTTATGGGTTCAAATAGGATCAACCTCAACTATTATCCCGTTTGCCCTAACCATGACCTAACGGTAGCAATAGGGCGACATTCTGATGTCTCAACCTTAACTATTCTCCTTCAAGATGAAACCGGTGGCCTTTACGTTCGAGCGCCAGACCACCGCAACTGGATTCACGTGCCACCGATCTCTGGTGCCCTAGTGATCAATATAGGCGATGCACTCCAAGTAATGAGCAATGGGCGATACAAGAGTATTGAGCATCGTGTGACAGCCAATGGAAGCAAGACTAGGGTTTCAGTGCCTATTTTTGTGAACCCCAGACCCTCAGATGTCATTGGCCCTTTGCCTCAAGTGCTTGTTAATGGGGAGAAGACCATGTATAAGCATGTGTTGTATTCGGATTATGTGAAGCATTTCTTCAAGAAACCTCATGATGGGAAGATGACCATTGAATATGCCAAGATATTTTGA 1065 0.4413 MAPTIPSDLTEFVMLQGNGVKGLSEMGLKSLPSQYIQPLEERMSMINVVPQESIPIIDMSNWDDPKVEDAICDAAEKWGFFQIINHGVPLQVLDDVKEATYRFYWLPPVEKVKYTKENSPSKHVRYGSSFSPEAEKALEWKDYLSLFYVSEDEAVTMWPPACRDEALEYMKRSEIVIKRLLNALMKRLNVRKIDETNESLFMGSNRINLNYYPVCPNHDLTVAIGRHSDVSTLTILLQDETGGLYVRAPDHRNWIHVPPISGALVINIGDALQVMSNGRYKSIEHRVTANGSKTRVSVPIFVNPRPSDVIGPLPQVLVNGEKTMYKHVLYSDYVKHFFKKPHDGKMTIEYAKIF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0702 354 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 8 345 - -
Ssu2g0702 354 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 8 345 - -
Ssu2g0702 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 152 IPR026992 -
Ssu2g0702 354 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Ssu2g0702 354 Gene3D - 9 336 IPR027443 -
Ssu2g0702 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 304 IPR005123 -
Ssu2g0702 354 SUPERFAMILY Clavaminate synthase-like 19 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0702 Ssu-Chr2 38434699 38437915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0702 19 353 Glycosyltransferase AT5G59530 34.286 3.05e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0702 K06892 K23378 gmx:100527581 647.891