Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0689 ATGAAACTTTCAACGTTCTCAACTAATGATTGCCCATTTGGGTTAAACGTACAAGATTCTCTCATTCATGGAATGGCagcagaaaaagaagaaaagaagaaagaagacaTTGAAGTGATCACTGCTATTTACAAAGTTAACCTGCATTGCAAGGAATGTGGAAGCAAGATCAAGAAGCATCTCATGATTACCGAAGAGAAGAAGAGCaagaaaaaagttgaattaATATCACCAAAAGTGAAGCCTAAGGAGATTACTACTACGGATAAAAAGCCAAAGGAAATCAAAGATCCAATTATCCGCATTATCTCGGTGAAGGTTCACATGCATTGTGACAAATGTGAGGCTGACCTAAAAAGTAGATTAATAAAGCACAAAGGTATTTTCAATGTTAAAACCGACCAGAAAGCACAAAGTGTGACAGTGGAAGGTACCATTGAAGTGGAGAAATTGATgtcatttttgagaaaaaaggtgCATAAAAATGCTGAGATTATTTCCATAAAGGAAgtgaagaaggaagagaagaagggcAAAGAGGAAGGGAAGTCTTCAGAAACAACCAAAGAGAAGGATCATAGTAAGTCTGGTGAATCAATCAAGAAAAAAGATGATAACAAATCAAGTGAATCAAccaaagagaaagaaggaaaatctGGTGAATCAACCAAAGAGAAAGAAGGTAAATCTGGTGAATCAACCACGGAAAAAGGAGACGGCAAGTCTAGTGAAACAACCAAAATAATAGAGACTCGTCAAGAGCACCCAAAAGAGATAAAGGACAATGTTCCTTATATCATTCACTACGTTTATGCGCCACAACTTTTCAGCGATGAGAATCCAAATTCGTGTTCTATTTTATAA 864 0.3194 MKLSTFSTNDCPFGLNVQDSLIHGMAAEKEEKKKEDIEVITAIYKVNLHCKECGSKIKKHLMITEEKKSKKKVELISPKVKPKEITTTDKKPKEIKDPIIRIISVKVHMHCDKCEADLKSRLIKHKGIFNVKTDQKAQSVTVEGTIEVEKLMSFLRKKVHKNAEIISIKEVKKEEKKGKEEGKSSETTKEKDHSKSGESIKKKDDNKSSESTKEKEGKSGESTKEKEGKSGESTTEKGDGKSSETTKIIETRQEHPKEIKDNVPYIIHYVYAPQLFSDENPNSCSIL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0689 287 Gene3D - 101 174 - -
Ssu2g0689 287 Pfam Heavy-metal-associated domain 105 161 IPR006121 GO:0046872
Ssu2g0689 287 CDD HMA 108 149 IPR006121 GO:0046872
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 28 63 IPR044577 GO:0046872
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 66 202 IPR044577 GO:0046872
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 194 287 IPR044577 GO:0046872
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4 66 202 - -
Ssu2g0689 287 SUPERFAMILY HMA, heavy metal-associated domain 100 157 IPR036163 GO:0046872
Ssu2g0689 287 MobiDBLite consensus disorder prediction 173 259 - -
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4 28 63 - -
Ssu2g0689 287 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4 194 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0689 Ssu-Chr2 37978298 37983114 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0689 - - gmx:100783418 317.005