Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0685 ATGGCTTCCCCCTCCAAAGGCGATGACGATCAGCTTCTGGTGCAGCGTAAATCATATGCGAGAGTTTTGACACTAAACAGGCCTAAGCAGTTGAATGCCCTCTCTTTTCATATGGTATCCCGGCTGCTTGAAATTTTTTCTGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGGCTTTTTGTGCTGGTGGTGATGTTGCAACTGTTGCTCGTGATGCAAGTAAAGTCCCATGCAATGTTGTCAGGATTGCGGACGATCTCATGATCTTGCAAGGCGATTCCAAGTCAGAATGGAGCTAA 321 0.4517 MASPSKGDDDQLLVQRKSYARVLTLNRPKQLNALSFHMVSRLLEIFSEDEENSDIKLVVVKGNGRAFCAGGDVATVARDASKVPCNVVRIADDLMILQGDSKSEWS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0685 106 SUPERFAMILY ClpP/crotonase 11 84 IPR029045 -
Ssu2g0685 106 Pfam Enoyl-CoA hydratase/isomerase 21 82 IPR045004 -
Ssu2g0685 106 CDD crotonase-like 12 78 - -
Ssu2g0685 106 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 10 82 IPR032259 GO:0003860
Ssu2g0685 106 Gene3D - 6 96 - -
Ssu2g0685 106 PANTHER BNAA02G34880D PROTEIN 10 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0685 Ssu-Chr2 37924752 37931040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0685 11 82 Miscellaneous Gene Families AT5G65940 66.667 3.57e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0685 K05605 - gmx:100170729 134.42