Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0683 ATGAAGTCCCTCAACCTGGAAATCAACGGTGTCACCGGTTCAGAGTCAAACCCGGTTTCCACAACCGAGCCCAACTCGAACCGGGTTCAGTTCTCGGACCAATCGATCTACGTTGACCCGGACCCAGGACACTCAATCCAAGACATTTATGAGCAGATTTTCGGGGAGCCATGGAGCGAAGCCTCGGCGGCAAAGAAATTGCCGCCGACAATGCAAGGCTTCGCTCAAAACGCCGCGAGGCAAGCGGAGCCAAAGAATGCAACAGTGACGATGACGGAGACAGTGATGAATGGGTTCAAACCGGATTTGGTTCCGGTTTATAAAGAGTTAGTTAAGGAGTTTGCGGTTTGTGACCGTTGGTTCGCTTCCGTTCCCGCTTCGACCCAACCGAACCGGCTCTATGTGCATTCTGCCACGTCACATGGGATGACAAGTAATGACACCAATAAGCTTGTTGGGGGGTTGCCTCAAAAGACGATATTTGATtctttggatgaaaatgggttcaGCTTTGGGATCTATTATCAGGCTCCACCTGCCACCCTTTTTTATCGGAGTCTTAGGAAACTGAAATATGTAGATAACTTTCGTCCATTCGACTTGTTCAAAAAGCATTGCAAAGAAGGGAAATTACCAAACTACGTCGTGGTTGAACAAAGATTTTTCGACTTGCTATCAATACCAGCGAACGACGATCACCCATCTCATGATGTTTCAGAGGGTCAAAAGTTTGTGAAAGAAGTGTATGAAGCACTAAGAGGTAGCCCACAATGgaatgaaattttgtttgtgATCATATATGATGAGCATGGAGGGTTTTATGATCACGTGCCAACCCCTGTGGAAGGAGTGCCTAGTCCAGATGACATTGTGGGTCCTGAACCATTCAAGTTCAAGTTTGATAGACTTGGTGTGAGGATTCCAGCCATTATTGTTTCTCCATGGATTGAGCCAGGCACAGTGTTACACGGACCTTCTGGACCATTACCAACATCACAATATGAGCATTCCTCTATAGCAGCAACTGTGAAGAAGATATTCAATTTGCCTGAATTTCTCACAAAGCGGGATGCATGGGCCGGAACATTTGAGGGCCTTTTAACTAGAAGCAGCCCAAGAACTGATTGTCCAGTGAATTTGCCTGACCCTATCAAACTACGAGAAGCTCCTGCTCATGAAAAGGCCAAGTTGAGTGAATTTCAGGAAGAATTGGTACAAATGGCAGCAACACTTAACGGGGATCATAGAAAGACTATATACCCCGACAAGTTAATTGAGAACATGAGTGTTTCGGACGCAGTTAAATATGTTGAAGATGCATTCAAGACATTCTTGAACGAGTGTGAGAAAGCAAAGCAAAGTGGTGCTGATGGATCTGAAATTGTCGATTGTGCTAATGGATCTAGCACACCACCCAATTCCAAAAATTTCATTGACAATATGTTGTCTTGTATAACATGTAATCGATAA 1470 0.4395 MKSLNLEINGVTGSESNPVSTTEPNSNRVQFSDQSIYVDPDPGHSIQDIYEQIFGEPWSEASAAKKLPPTMQGFAQNAARQAEPKNATVTMTETVMNGFKPDLVPVYKELVKEFAVCDRWFASVPASTQPNRLYVHSATSHGMTSNDTNKLVGGLPQKTIFDSLDENGFSFGIYYQAPPATLFYRSLRKLKYVDNFRPFDLFKKHCKEGKLPNYVVVEQRFFDLLSIPANDDHPSHDVSEGQKFVKEVYEALRGSPQWNEILFVIIYDEHGGFYDHVPTPVEGVPSPDDIVGPEPFKFKFDRLGVRIPAIIVSPWIEPGTVLHGPSGPLPTSQYEHSSIAATVKKIFNLPEFLTKRDAWAGTFEGLLTRSSPRTDCPVNLPDPIKLREAPAHEKAKLSEFQEELVQMAATLNGDHRKTIYPDKLIENMSVSDAVKYVEDAFKTFLNECEKAKQSGADGSEIVDCANGSSTPPNSKNFIDNMLSCITCNR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0683 489 MobiDBLite consensus disorder prediction 1 27 - -
Ssu2g0683 489 Gene3D Alkaline Phosphatase, subunit A 210 394 IPR017850 -
Ssu2g0683 489 Gene3D Alkaline Phosphatase, subunit A 3 168 IPR017850 -
Ssu2g0683 489 Pfam Phosphoesterase family 8 350 IPR007312 GO:0016788
Ssu2g0683 489 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 1 470 IPR007312 GO:0016788
Ssu2g0683 489 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 1 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0683 Ssu-Chr2 37874908 37880286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0683 1 485 Acyl Lipid Metabolism Gene Families AT3G03530 62.549 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0683 K01114 - gmx:100805391 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0683 2 37874908 37880286 Ssu2g0683 2 37874908 37880286 ECH