Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0680 ATGGATGCAATTCCATTATTTagtgagaaaatgaaattgGCTCAAAAAGCAGCCACGGCTATTCGATGGGAAGACttcaagaaaataatgaaggatGACAAGGAAAACTTACTCAAGTGGTTAGACCTCTTTGGGAACAATGCCATCCACGTTGCAACTCGCTCTAACAACCCGCAACTCcttaaagaattaatagaaGTGTTGCCTAAAGAAGGTAGGTGGCAAGCTATGTGCAAGGAAAATCGTGAAGGAAATACTATTTTGCACGAGGTTGTCTTTTGCGAAAATGTGCAAATGGCAGATGTTGTGTTTGATCTTGAAGAAGAGTTGCAACCACAATCACCAGAGGTAAAAAGGTCATTACTAGAGCACGAAAACCGCCGAGGTGAAGCCCCGTTGTTCATGGCTGCAATGCATGGAAAGCTAAAGATGCTCAAGCATATGGCCAAACATATAGCAAAGCATAATATGGgagatattagaaaatatttacataGATCTTACAAATGTTCAGCTCTTCATGCTAGTGTCATTGAGCAACATTTTGATGTTGCAATTTGGCTAGTAAGAATGGATAAAGAACTTGCTATGGAAAAGGATGAGAAGGAATCAACATGTCTACAACTACTTTCAAAGATGCCACAGAGGGGGATCCTTGAGTCTTCTTCACTTGCTATCCCATCATGGGTCGTTTGGCTGAGGATATGCCCTTTGTTATTAGCTTGCAGACAATTGGTGATAGGTTGTTTTGAGGGAGCTCATGGTGGGGAAGTTTGCTACGATGGCAAAGTAGTCACCACCTTTGGGCTTAGAAACGAGAATAAGAGTGAAGTGCCAAAGGTTGTGGCTGAGGTGGTTGTAATGTAG 867 0.3945 MDAIPLFSEKMKLAQKAATAIRWEDFKKIMKDDKENLLKWLDLFGNNAIHVATRSNNPQLLKELIEVLPKEGRWQAMCKENREGNTILHEVVFCENVQMADVVFDLEEELQPQSPEVKRSLLEHENRRGEAPLFMAAMHGKLKMLKHMAKHIAKHNMGDIRKYLHRSYKCSALHASVIEQHFDVAIWLVRMDKELAMEKDEKESTCLQLLSKMPQRGILESSSLAIPSWVVWLRICPLLLACRQLVIGCFEGAHGGEVCYDGKVVTTFGLRNENKSEVPKVVAEVVVM 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0680 288 SUPERFAMILY Ankyrin repeat 37 215 IPR036770 -
Ssu2g0680 288 Gene3D - 12 221 IPR036770 -
Ssu2g0680 288 SMART ANK_2a 168 197 IPR002110 GO:0005515
Ssu2g0680 288 SMART ANK_2a 44 77 IPR002110 GO:0005515
Ssu2g0680 288 SMART ANK_2a 128 157 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0680 Ssu-Chr2 37700670 37705144 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0680 - - ccaj:109812492 336.65