Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0678 ATGGCTTCTGCATCTCCCACACTCCCTTTGGCTTTCGCCCAACAACATCACCGTGTTTCTCAGCGTCACGTTTTCTTCTTCGCTGAATTCCGTAGAAGAGTTCACTTGTCTTCTTCTTTGGCTTCGAGACGGAGGCGTAATTCCAAGTGCGTTTACGCGAAAGCGCAAAACGCTCTCAACGAAGAAGTGGTTGAAACTCAAAGTTTGGAGTTGAAGAAGGATACCCAACGCACCCCGTCTTCCTCCAAACTGGTCCTTGTTGTTGGTGGCTCGGGAGGCGTTGGGCAGCTGGTAGTAGCATCACTGCTTCAGAGGAATGTTAAGTCACGCTTGATACTTAGGGATCCTGAGAAAGCCACAGAACTGTTTGGTGAACAAGATAAGGAGAAACTGCAGGTATTCAAAGGAGACACAAGGAAGCAGGAGGATTTGGATCCATCAATATTTGAGGGTGTCACACACGTGATTTGCTGCACGGGAACAACAGCTTTTCCTTCAAGGCGGTGGGATGATGATAATACACCAGAAAGGGTTGATTGGGTGGGAGTAAAGAATCTAGTGTCTGCATTGCCTTCCTCAGTCAAGAGAGTTGTTCTTGTGTCATCGATAGGTGTGACCAAGTTCAATGAATTGCCATGGAGCATTATGAACCTATTTGGTGTCCTGAAGTATAAGAAGATGGGGGAGGATTTTCTTAGGAGTTCTGGCCTTCCATTTACCATAATCAGAGCCGGAAGGTTGACAGATGGACCATACACATCTTATGATCTCAATACTTTACTCAAAGCAACAGCTGGGCAACGACGAGCAGTCCTTATAGGTCAAGGAGATAAACTAGTGGGAGAGGCCAGCAGAATTGTGGTTGCTGAAGCTTGCGTGCAGGCACTAGATCTCGAAGTCACTGAAAACCAAGTATATGAAGTTAACTCTGTTGAGGGGGAAGGTCCTGGAAGTGAAGCTAAGAACTGGCAAGAATTATTCGAGGCTGCGCGATCCCGCTAA 1002 0.4691 MASASPTLPLAFAQQHHRVSQRHVFFFAEFRRRVHLSSSLASRRRRNSKCVYAKAQNALNEEVVETQSLELKKDTQRTPSSSKLVLVVGGSGGVGQLVVASLLQRNVKSRLILRDPEKATELFGEQDKEKLQVFKGDTRKQEDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPERVDWVGVKNLVSALPSSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRSSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACVQALDLEVTENQVYEVNSVEGEGPGSEAKNWQELFEAARSR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0678 333 Pfam NAD(P)H-binding 89 297 IPR016040 -
Ssu2g0678 333 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 70 330 - -
Ssu2g0678 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 309 IPR036291 -
Ssu2g0678 333 CDD SDR_a5 100 308 - -
Ssu2g0678 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 70 330 - -
Ssu2g0678 333 Gene3D - 81 333 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0678 83 210 Miscellaneous Gene Families AT1G09510 36.496 1.97e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0678 - - gmx:100804322 555.444