Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0661 ATGAACCAAACCACCGGCGCGAACTTCGAAAAACCGATAGGCTGTTACTCTCCATCAGTTCAAGAGCTTATTGTTATTGATGATGTGCTCTCGGCCATGGTTGGCGTTGAAGGACGTTACATCTTAATCAAAGCAGTTCATGGAAAGAATGATGATATTACTTTCCTGGTTGACCCATCAACGGATTTGGCCCTGCAGGAGTTGGCAAAACGGATATTCCCTCTTTGCAAGAGCTTTCTGTTGATCAACCAGTTTGTGGAGTCAAGGTCTCAGTTCCAGAGTGGCCTGGTTAATCATGCGTTTTCTGCTGCACTGAGGGCACTTCTTCTCGATTACCAGGCTATGGTGGCACAGCTCGAACACCAATTTCGGCTGGGGAGACTTTCCCTTCAAGGATTGTGGTTCTACTGTCAGCCCATGATGAGGTCAATGCAGGCATTATCCACTGTCATACAGAAGGCTTCAGTCAACAATTTTTCTGGTTCTGCTGTTCTTAACTTACTGCAGAGCCAGGCAAAGGCTATGGCTGGAGACAATGCCGTCAGGTTGTTGCTGGAGAAAATGACAGAATGTGCAAGTAGTGCTTACATGAGCATATTAGAAAGATGGGTTTACGAAGGTGTAATAGATGATCCTTATGGTGAATTTTTCATTGCAGAGGACAAATCTCTTCAAAAGGAGAGTCTCACTCAAGATTATGAAGCTAAGTATTGGCGACAACGTTACAGCCTCAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCGGGGACAATTTTGACAACAGGAAAATATCTTAATGTCATGAGAGAATGTGGGCACAATGTTCAGGTCCCTCCATCAGAGAATTCAAAACTAATGAGTTTTGGCTCAAATCATCAATATCTTGAATGTATTAAGGCTGCTTATAACTTTGCAAGTGGTGAACTCTTGAATCTCATTAAGGAAAAGtatGATCTAACGGGAAGGCTGCGTTCTATAAAACACTACCTTCTTCTTGATCAGGGTGATTTCTTAGTACATTTTATGGATATTGCTCGAGATGAGCTGGCAAAAAAGCCTGATGAAGTCTCAGTTGAGAAGCTGCAGTCTCTTCTAGACCTTGCATTGCGTACtacagcagcagcagcagatCCTTTTCATGAAGGCTTAACCTGTGTTGTGGAAAGATCCTCGCTGCTTAGAAGGTTGGGTACATTTAATGATCTTGAAGTTAGTCAGAGAAATTCTGGTAACAATGATCTGGAGGAGCCTGTTAGCATCACTAGCCTTGAAACATTTTCACTAAGTTATAagGTGCACTGGCCACTGTCTATAGTATTATCACGTAAAGCCCTTACAAAGTACCAATTAATTTTTCGATTTCTTTTCCACTGTAAACATGTTGACCGTCAGTTGTGTGGAGCATGGCAAGTACATCAAGGAGTTCGTGCTCTCAATACACGTGGAACTGCTATCTCTAGATCATCTCTTCTTTGCCGGAGtatgcttaaatttattaatagcCTTTTGCACTATCTGACATTTGAGgTTATTGAACCCAATTGGCATCTGATGTATAACAGACTTCAGTCAGCAAATAGCATAGATGAGGTTATACAACATCATGATTTTTTCCTTGATAAATGCTTGAGAGAATGTTTACTTCATTTACCTGGGCTACTGAAGAAGGTGGAGAAGCTTAAATCCATGTGCCTGCAATATGCAGCAGCAACTCAGTGGCTTATATCATCTTCTATTGAATTACATAATCCAGAGGAACCTATTGATGATTCAATCGGCTTGAATAAAGCCAAACAACGGAAATCAGGTCAGGTCCTGAAGTCAACCACCAGAAATGTGGCAGTAACTGATTCTGTTCTCAAATTTGAGAAAGAGTTTAATACTGAGCTCCAGAGTCTTGGATCAATCTTGAATAGTAGCTCCCAGGCAGAGCCATACCTGGCTCATCTTGCACAATGGATTCTTGGtgttaaaaatgaacaaaatggTTTATGA 1998 0.4034 MNQTTGANFEKPIGCYSPSVQELIVIDDVLSAMVGVEGRYILIKAVHGKNDDITFLVDPSTDLALQELAKRIFPLCKSFLLINQFVESRSQFQSGLVNHAFSAALRALLLDYQAMVAQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTVIQKASVNNFSGSAVLNLLQSQAKAMAGDNAVRLLLEKMTECASSAYMSILERWVYEGVIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHQYLECIKAAYNFASGELLNLIKEKYDLTGRLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPFHEGLTCVVERSSLLRRLGTFNDLEVSQRNSGNNDLEEPVSITSLETFSLSYKVHWPLSIVLSRKALTKYQLIFRFLFHCKHVDRQLCGAWQVHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHLMYNRLQSANSIDEVIQHHDFFLDKCLRECLLHLPGLLKKVEKLKSMCLQYAAATQWLISSSIELHNPEEPIDDSIGLNKAKQRKSGQVLKSTTRNVAVTDSVLKFEKEFNTELQSLGSILNSSSQAEPYLAHLAQWILGVKNEQNGL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0661 665 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 657 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Ssu2g0661 665 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 12 657 - -
Ssu2g0661 665 Pfam Gamma tubulin complex component N-terminal 26 317 IPR041470 -
Ssu2g0661 665 Gene3D - 320 656 IPR042241 -
Ssu2g0661 665 Pfam Gamma tubulin complex component C-terminal 320 652 IPR040457 GO:0043015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0661 K16569 - gmx:100795585 1237.25