Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0659 ATGGAAGAGTATTACTACAAGAGGCACCATGTGCCAGCGTTTGGGAGCTGGGATTGGAATGATAATCTTCCCTTCACGCAGTGCTTTGAGTCTGCGAGACAAGCTGGTTTGCTAAGATATAGTTACTCTGAGTCTGAAGATAGGGACCTTTATGTCACTGGGGACTTGTACGAGAATGATGTTGTCACGCCCGCTATGATCGTTGTTCCTCGCAGAAGGGAAAAGGTACGTTGCCAGAatgaaaaagaagcaaaaaagcAGAATTGGGTCAGTAATGTGAAGGAGCCACCTAGTCCAACTAGTCCAATGCCAATGCCAAGACCAAAACCAAAGCCCGTGGATGAGGACTTGTACAAGATCTCACCAGAGCTTCTTTATGCCAAAACTAGGAAGGTCTTAACTCTTTCCCCCCACAAcccttttacttttttctccACTAAACTCACATTTTTGGTGAGCTTTACTTTCATAATGTCAATTCATTGCATATTCAAACCTTTGCTTTTTGCATCTTTAGCAAAAGGTTTTATAaatctccttttctaa 546 0.3919 MEEYYYKRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYSESEDRDLYVTGDLYENDVVTPAMIVVPRRREKVRCQNEKEAKKQNWVSNVKEPPSPTSPMPMPRPKPKPVDEDLYKISPELLYAKTRKVLTLSPHNPFTFFSTKLTFLVSFTFIMSIHCIFKPLLFASLAKGFINLLF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0659 181 MobiDBLite consensus disorder prediction 78 110 - -
Ssu2g0659 181 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 1 131 - -
Ssu2g0659 181 PANTHER EXPRESSED PROTEIN 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0659 Ssu-Chr2 37158340 37160824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0659 - - var:108347066 249.98