Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0655 ATGACTGGGATTCCTGAAGAAATGCCCGTCACTCTTGATCTGCTTAAGCAGAAAATGAGTGAGTTTGCAAAGGAGAGGGATTGGGAGCAGTTTCATAGCCCAAGGAACCTGCTTTTGGCTTTGGTGGGTGAAGTGGGAGAATTGTCTGAGATATTTCAGTGGAAAGGGGAGGTTCCAAAGGGGCTTCCAGATtggaaagaagaggaaaaggttCATCTTGGTGAAGAGCTCTCAGATGTGTTGCTTTACCTTGTCCGGCTCTCTGACATTTGTGGTGTTGATCTTGGCAAAGCCGCTTTAAGAAAGATTGAACTCAATGCTATAAAATACccaaaaaaattttatgaagacCCTTCAAGCAGCACTAAGGATCAAAGCACTGCCAACCCGACACCAATTGATAATGCAACTGATGGTGATTGA 423 0.409 MTGIPEEMPVTLDLLKQKMSEFAKERDWEQFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEKVHLGEELSDVLLYLVRLSDICGVDLGKAALRKIELNAIKYPKKFYEDPSSSTKDQSTANPTPIDNATDGD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0655 140 PANTHER OS04G0346800 PROTEIN 5 124 - -
Ssu2g0655 140 SUPERFAMILY all-alpha NTP pyrophosphatases 11 115 - -
Ssu2g0655 140 Gene3D - 6 115 - -
Ssu2g0655 140 MobiDBLite consensus disorder prediction 114 140 - -
Ssu2g0655 140 CDD NTP-PPase_RS21-C6_like 16 106 IPR025984 GO:0009143|GO:0047429
Ssu2g0655 140 MobiDBLite consensus disorder prediction 120 140 - -
Ssu2g0655 140 Pfam MazG nucleotide pyrophosphohydrolase domain 33 101 IPR004518 -
Ssu2g0655 140 PANTHER - 5 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0655 Ssu-Chr2 36975753 36977476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0655 K16904 - gmx:106798062 216.468