Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0654 ATGACAACTCAAGAGACCTCAGCTCCGCTCCGCCTCGACACGCCGCGCGCCGCCCCGCTCCCGTACTCAGGCCGGGTTCCGGTGAAGGCGCTGCTGGACCGGCCCGAGGCGGCGGTGGGACGGCGCGTGGTGGTAGGCGGGTGGGTGAAGTCCTCGAAGGAGGTGGAGAAGTCGGCACCGCCGCCGCCGCTGACGACGGACGACACCGCCGGGGAAGGGAAGTGCAAGGACGTGACGTGCGCGGAGATTCTGCAGTCGCGGATACCGCTGATTCGGAGCATAATGGATGTGTTCGGAGGAAGCGGTTACGGGCAGCGCAAGAAACGTGAGTCTGGGACTGTGCCTCATCAGCCTAAGGTTCTGCCTCCCAAAGCTTCTACTGCGTACCTGCTTCTCACGGATGGGTCATGCGTTTCCAGCCTTCAGGTTGTTGTTGATTCCTCCGTAGCTACCCCCAGCCGGCTTCTGCCTACTGGAACGTGTCTATTAGTGGAAGGTCAACTAGAAGGAGCAGAGGGGAAGCATGTTATTGAGCTTAAAGCTGAAAAAATTCTTCACATTGGGACGGTAGATTTTGACAAGTACCCATTATCAAAGAAACGAGTTCCACTAGAAATGTTGAGAGATTATTCCCAATTTCGGCCTCGAACAACTACGGTGGCAACTGTCATGCGGATTCGTAGTGCCCTCTCTTTTGCAACCCACACATTTTTCAGTGAACATGCATTTATTGATGTGCAAGTACCCATTACAACTACCACAGACTCTGAAGGATTTAGCAACATGTTCCGGGTTACCACCCTGGATCAGAAAGCAGAGAAGGAGAAACTAGGTACTATTTTTGAGACTGAAGATGTTAACCTTGAGCACGTGAAGGCAGCTGCAAAAGAGAAAAGCAGCATAGTTGAGCATTTGAAAAGAACTGAGAGCAATAGGGAAGCACTGGCTGTTGCAATTCAGGATCTGAGGAAAACCAGTGAACTGGCATCACAATTGGAAGCAAGAGAAAAGAGGAAGTTAAGAACATCTTTTAAGGATGACAAAGTAGACTCTTCCAAAGATTTTTTCCCTTTCCAGACTTATTTGACTGTCTCTGGTCGCTTGCATCTGGAGAGTTATGCTTGTGCTCTTGGAAATGTCTACTCATTTGGTCCTAGATTTCAAGCAGATCAAATAGATTCTGCTAAACATGCTGCAGAAATGTGGATGGTTGAGGTTGAAATGGCCTTTTCTCAATTAAAGGATTCCATGAATTGTGCTAATGACTTTTTCAAGTACCTCTGCAAGTGGATTCTGGAAAATTGCTCTGAAGATATGAAGTTTGTTGCCAAAAGAATTGACAACACCTGTACGAATCGTCTTCGGCAGATTACATCAAGTTCTCCTGAAATGATGTCCTACAATGATGCTATAGATGTTCTTAGAAGGTTGTCCTCCCAAGCTGAAGATAAgaaatttgatacaaattttgaatCGGGTTCTGTACTCACTTCAGAGCACCTAAGCTATCTAACTGATACCATCTTCAAGAAGCCGATTATGATATACAATTATCCAAAAGAAGCTAAGCCATTTTACGTTCGCCATAATGATGATGGAACTGTAGCTGCATTTGACTTGGTTGTCCCAAAGCTTGGAACAATGATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGGATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCTTCGTCGAAATGGAACAGTGAAGAACTCTGGGTTCACTCTAAGGTTTGACCGTATGGTCCAATTCACAACTGGCCTTAGCAATGTCAGGGACGTTATCCCTTTTCCAAGAAGCTGTGACAAGGccaataactaa 1875 0.464 MTTQETSAPLRLDTPRAAPLPYSGRVPVKALLDRPEAAVGRRVVVGGWVKSSKEVEKSAPPPPLTTDDTAGEGKCKDVTCAEILQSRIPLIRSIMDVFGGSGYGQRKKRESGTVPHQPKVLPPKASTAYLLLTDGSCVSSLQVVVDSSVATPSRLLPTGTCLLVEGQLEGAEGKHVIELKAEKILHIGTVDFDKYPLSKKRVPLEMLRDYSQFRPRTTTVATVMRIRSALSFATHTFFSEHAFIDVQVPITTTTDSEGFSNMFRVTTLDQKAEKEKLGTIFETEDVNLEHVKAAAKEKSSIVEHLKRTESNREALAVAIQDLRKTSELASQLEAREKRKLRTSFKDDKVDSSKDFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFQADQIDSAKHAAEMWMVEVEMAFSQLKDSMNCANDFFKYLCKWILENCSEDMKFVAKRIDNTCTNRLRQITSSSPEMMSYNDAIDVLRRLSSQAEDKKFDTNFESGSVLTSEHLSYLTDTIFKKPIMIYNYPKEAKPFYVRHNDDGTVAAFDLVVPKLGTMISGSQNEERLNMISSRIDELGLPREKYEWYLDLRRNGTVKNSGFTLRFDRMVQFTTGLSNVRDVIPFPRSCDKANN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0654 624 TIGRFAM asnS: asparagine--tRNA ligase 125 622 IPR004522 GO:0000166|GO:0004816|GO:0005524|GO:0006421
Ssu2g0654 624 Pfam tRNA synthetases class II (D, K and N) 205 268 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Ssu2g0654 624 Gene3D Bira Bifunctional Protein; Domain 2 196 623 IPR045864 -
Ssu2g0654 624 PANTHER ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2-RELATED 22 624 - -
Ssu2g0654 624 Coils Coil 305 325 - -
Ssu2g0654 624 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 22 624 - -
Ssu2g0654 624 SUPERFAMILY Class II aaRS and biotin synthetases 204 617 IPR045864 -
Ssu2g0654 624 Pfam tRNA synthetases class II (D, K and N) 351 617 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Ssu2g0654 624 MobiDBLite consensus disorder prediction 52 72 - -
Ssu2g0654 624 CDD EcAsnRS_like_N 128 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0654 Ssu-Chr2 36935237 36940793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0654 K01893 - gmx:100787363 988.408