Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0652 ATGGATGTCAAAACCAAAAGGAGAGCTGATGTAGAGAATGGTGATGAAGGAGAAGACTTAGTTCTAGCTACTCTGGTTGCCAATGGAGATGATATTAGTCCTCTTGTCAGGCATGCCTTTGAAATGGGGCGCCCTGAAGGGCTCCTACGCCAGCTGAATTATGtggtgaagaaaaaggaagcTGAAATTGAGGAGATGTGCAAGACACACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGTGGTGTGTTAGTTGATGCTGAAGAGCTCAAGAGTGAACTCCAAAGTGATAATTTTAAGTTGCAGCAGGTTGGCAGCACCCTTCTTGTCAAGCTTGAGGAGCTTCTTGAATCGTATACAGTCAAGAAGAATGTTACTGAAGCTATAAAAATGTCAAAGAACTGTATAAAGGTGTTGGAGCTTTGTGTTAAGTGCAACAATCACATTTCTGAGGGCCAGTTTTATCCTGCACTGAAAACTGTCGATTTACTTGAGAAGAATTACATGCAGAATATTCCTGCCAAGGCCCTCAAAAGggtgatagagaaaaaaattcctTCCATAAAATTGCACATTGAGAAGAAAGTATGCAGTCAAGTTAATGAATGGATGGTCCAAATACGAAGTTCTTGTAAAATAATTGGGAAAACGGCTATTGGTCGTGCTGCATCAGTTCGGCAGAGGGATGAGGAAATGctggaaaggaagagaaaggcTCAGGAATTAAATATTTCAGGAGTTGATGATCAAGCTTATAGTTTGGTGgttgaagaagatgaagattcTGCTATGAAGTTTGATCTCACACCTCTTTATCGTGCTTGTCATATTCATGGTTGCCTGGGGATCCGAGAGCAGTTTCATGAATATTACTATAAGAATAGATTGTTACAATTGAATTCAGATTTGGAGATATCTTCAGCGCAACCTTTTGTTGAATCATATCAGACTTTTTTGGCTCAAATTGCTGGGTACTTCATAGTGGAGGATAGGGTCCTGAGGACTGGTGGTGGGCTCCTGGTAGCTGATCAGGTTGAAACTATGTGGGAAACTGCTTTAGCAAAAATAACATCAATGTTGGACATGCAATTCTCCCATATGAACTCTGCCACCCATCTTCTCCTAGTTAAGGATTATGTTACACTTCTAGGGTCTACTCTTAGACAATATGGATATGACATTGGCCAACTTCTTGATGTGCTTGATAATAGCCGTGCCAAATACCATAGGCTTCTTTTGGAAGAATGTCGGAGCCAAACTGTTGATGTTCTTGGCAACGACTCATATGAGCAGATGGTGATAAAAAAGGATACTGATTATGAGAATAATGTTCTGTCATTTAATCTTCAAACATCGGATATTATGCCTGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCTGATGCTTGTCGCATAGTGAGATCCTTCATCAAAAGCTCTGTTGATTACTTGTGTTATGGTGTACGTACCGGTTTTTTTGATGTTGTGAGGAAGTATTTGGACAAGTTCCTGAttgaagtattaaatgaaaCTTTACTTGATACAATCAATAGTGGAAATATCAGTGTGTCTCAAGCCATGCAGCTTGCTGCAAACATAGCTGCTCTTGAAAGAGCTTGTGATTTTTTCCTCCGACATGCAGCTCAACAGTGTTGCATCCCAGTTAGATCAGTTGAGAAGCCCCAAGCTACTTTAACTGCGAAGGTGTTACTGAAGACTTCGAGGGATGCAGCTTATATTACTCTGCTGGGTTTGGTAAACACAAAATTAGATGAGTATATGAATCTTATAGAAAGTATCAACTGGACTTCAGAGGATGCAAAGCCAAATGGAAATGACTACATAAATGAAGTGATCTTTTATCTTGATTCACTTATGTCCACAGCTCAACAAATTTTACCCTTAGATGCTATGTACAAGGTCGGGACTGGTGCACTTGAGCATATTTCCAATACTATGGTGGGTGCTTTCCTTAGTGATAATGTCAAAAGGTTTAATGCAAATGCTGTTATGAGTATCAACAATGATCTTAGGATGTTAGAGAATTTTGCGGATGAGAGGTTCTATTCTTCTGGCTTGGGTGAAATTTACAAGGAAGGTAGTTTTAAGAGCTGTATGATAGAAGCACGGCAATTAGTCAATCTTCTGTCAAGTAGTCAACCTGAGAACTTCATGAATCCTGTTATAAGGGAGAAAAATTACTATGCGTTGGATTACAAGAAGGTAGCCACCATTTGTGATAAATTCAAGGATTCTCCAGATGGGATCTTTGGAagtctttcaaataaaaatacaaagcaaAGTGCTAAAAAGAAATCAATGGACACGCTCAAAAAGCGACTTAAGGATTTCAATTGA 2367 0.3777 MDVKTKRRADVENGDEGEDLVLATLVANGDDISPLVRHAFEMGRPEGLLRQLNYVVKKKEAEIEEMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSTLLVKLEELLESYTVKKNVTEAIKMSKNCIKVLELCVKCNNHISEGQFYPALKTVDLLEKNYMQNIPAKALKRVIEKKIPSIKLHIEKKVCSQVNEWMVQIRSSCKIIGKTAIGRAASVRQRDEEMLERKRKAQELNISGVDDQAYSLVVEEDEDSAMKFDLTPLYRACHIHGCLGIREQFHEYYYKNRLLQLNSDLEISSAQPFVESYQTFLAQIAGYFIVEDRVLRTGGGLLVADQVETMWETALAKITSMLDMQFSHMNSATHLLLVKDYVTLLGSTLRQYGYDIGQLLDVLDNSRAKYHRLLLEECRSQTVDVLGNDSYEQMVIKKDTDYENNVLSFNLQTSDIMPAFPYVAPFSSMVPDACRIVRSFIKSSVDYLCYGVRTGFFDVVRKYLDKFLIEVLNETLLDTINSGNISVSQAMQLAANIAALERACDFFLRHAAQQCCIPVRSVEKPQATLTAKVLLKTSRDAAYITLLGLVNTKLDEYMNLIESINWTSEDAKPNGNDYINEVIFYLDSLMSTAQQILPLDAMYKVGTGALEHISNTMVGAFLSDNVKRFNANAVMSINNDLRMLENFADERFYSSGLGEIYKEGSFKSCMIEARQLVNLLSSSQPENFMNPVIREKNYYALDYKKVATICDKFKDSPDGIFGSLSNKNTKQSAKKKSMDTLKKRLKDFN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0652 788 PANTHER SEC15 1 788 IPR007225 GO:0006886|GO:0090522
Ssu2g0652 788 PIRSF Sec15 1 788 IPR007225 GO:0006886|GO:0090522
Ssu2g0652 788 Gene3D - 395 567 IPR042045 -
Ssu2g0652 788 Coils Coil 78 98 - -
Ssu2g0652 788 Pfam Exocyst complex subunit Sec15-like 441 752 IPR046361 -
Ssu2g0652 788 PANTHER EXOCYST COMPLEX COMPONENT 1 788 - -
Ssu2g0652 788 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 577 727 IPR042044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0652 Ssu-Chr2 36891194 36893560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0652 K19985 - gmx:100796988 1437.94