Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0651 ATGAAATCATATCGATCTCGATTTCAGAGAATCTATGACTTGTATATGAGTGATGATTCCTCATCTTTCTCACGGATTGAGCAACAGTTTCCTCATTTGCAGCAGTGGCTTGGCTTAGCGGCTGCTGGCACTGTGGAGCTTGGTCATATAGTTGAGTCTCCTGCTGTTCGAACTGCAACTTCAGTTGTTCCTTTGGGATGGAATGATGGACTAGGAGCAAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATTTATGTACACTTGTTCATGCTCAAGTGAATGGTTACTGgTGTTCAACTTCAGTTGAATTGTTTCCTTCTCCACCAAACTATTCTTCAAATCAAGGAATCCAGCCTGAGTTACAGAAGTTGAGAATATTAGTTGGTCCGCCGCTAAGAAGTCCACCAAAGCATCAAACTGTGTTAGACTCATTGATGCCAGCTTTTACTTCTGTGGACTCTGAGACTGCAAGTAGTTCAGCACCTGTTGACAAGGATAAATTTATCCGTCCAGAAAGCTTAAATAACTTTGTAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAAGTTCATGTGAGAACCCGTAGAGTACGATTAGTTGGGCTGGAGGGAGCTGGTAAAACTACTCTTTTAAAGGCTGTCTTGAATAAATGTAAACCAAATACTGCCACCAATGAGGATGTGGATTCAGAGGTTGATGTGCGAGAAGTTATTGCTGATGGTTTGTGCTATTGTGACTCCGCCGGAATAAATATGCAGGAACTGAATGTGGAAACCTCTCGCTTCAGGGATGAACTATGGCTTGGAATCCGAGATCTAAGTCAGAAGACAGATTTGATTGTTTTTGTTCATAACTTATCCCATAGCATACCTCGATGTAGTAATTCAAATGATACTCAACAAAGGCCAGTCCTGTCACTTTTCTTGGATGAAGctaaatctcttggaattcctTGGGTTCTTGCAATCACAAACAAATTTGCAGTTAGTGCACACCATCAAAAGGCAGCAATTGATGCTGCTTTGAAAGCATACCAAGCATCCTTTGGCTCAGCTGAAGTTATAAATTCTTGTCCATATGTTATGCCAGGATTTGCTGGGGCTTCTATTTCTTTGGATGCAACCAATACAGATTCTAATAGAAGGGTGGGTGCTGAAAAGCTTATATTTGCTCCTATTAACTTCATTAGGAAGCCTTTCCTGAAAAAGGAGATTGTTCTTCCAGTAGAAGGAGTAAATTCTCTTTGTCAGCAAATCCACCATATACTCCGCAGTCATGAGGAGTCTTCCTTTCAGGAATTTGCAAGAGATAGGCTTATGATGGAGTTGGCACGAGAACAAGCAATGTCAATTGAGGCAAGTAGAGACGCTCGAGCTAAGGCAAATTCATTGAATTCTGCTGCTGTGGGAGCATCCGTTGGTGCTGGTCTTGGCCTTGTCCTGGCAATTGTAATGGGGGCAGCATCTGCCCTGAGGAAGCCCTAA 1506 0.4137 MKSYRSRFQRIYDLYMSDDSSSFSRIEQQFPHLQQWLGLAAAGTVELGHIVESPAVRTATSVVPLGWNDGLGAKNGEPLKVDITGFGLHLCTLVHAQVNGYWCSTSVELFPSPPNYSSNQGIQPELQKLRILVGPPLRSPPKHQTVLDSLMPAFTSVDSETASSSAPVDKDKFIRPESLNNFVIFCTSDFTTVSKEVHVRTRRVRLVGLEGAGKTTLLKAVLNKCKPNTATNEDVDSEVDVREVIADGLCYCDSAGINMQELNVETSRFRDELWLGIRDLSQKTDLIVFVHNLSHSIPRCSNSNDTQQRPVLSLFLDEAKSLGIPWVLAITNKFAVSAHHQKAAIDAALKAYQASFGSAEVINSCPYVMPGFAGASISLDATNTDSNRRVGAEKLIFAPINFIRKPFLKKEIVLPVEGVNSLCQQIHHILRSHEESSFQEFARDRLMMELAREQAMSIEASRDARAKANSLNSAAVGASVGAGLGLVLAIVMGAASALRKP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0651 501 Gene3D - 203 364 IPR027417 -
Ssu2g0651 501 Pfam 50S ribosome-binding GTPase 204 303 IPR006073 GO:0005525
Ssu2g0651 501 CDD Ras_like_GTPase 206 369 - -
Ssu2g0651 501 PANTHER F21O3.11 PROTEIN 1 501 - -
Ssu2g0651 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 349 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0651 1 501 Acyl Lipid Metabolism Gene Families AT3G07400 57.367 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0651 - - gmx:100797525 894.034