Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0645 ATGTCTGGGGAAGAGGAAGAAAACGCCGCAGAGCTTAAAATTGGAGACGagttTTTGAAGGCAAAGTGCTTAATGAACTGCGAAGTTGCATTGATTCTTGAGCATAAGTATGAGCAGCTTCAACAGACATCCGATGATCCCATGAATCAAATTTCTCAGGTATTTGAAAAGTCATTGCAGTATGTGAAGCGTTTCAGCCGCTATAAAAATCCTGATGCTGTTAGACAAGTTCGAGAAATTCTCGCACGATATGAATTGGCTGAGTTTGAGTTGTGTGTCCTTGGCAATCTTTGTCCGGAAACTGTGGAGGAAGCTATTGCTATGGTTCCATCTATCaagACAAGAGGACGGGCTCAGGATGATGAAGCAATTGAGAAAATGTTAAACGACTTATCATtgattaagaaatttgaataa 417 0.3909 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQISQVFEKSLQYVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0645 138 PANTHER DNA-DIRECTED RNA POLYMERASE II SUBUNIT 4-LIKE 1 138 - -
Ssu2g0645 138 Gene3D - 2 138 IPR038324 -
Ssu2g0645 138 PANTHER DNA-DIRECTED RNA POLYMERASE II 1 138 IPR045222 -
Ssu2g0645 138 SMART rpol4neu2 16 138 IPR006590 -
Ssu2g0645 138 Pfam RNA polymerase Rpb4 23 132 IPR005574 GO:0006352|GO:0030880
Ssu2g0645 138 SUPERFAMILY HRDC-like 3 136 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0645 Ssu-Chr2 36548976 36552337 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0645 K03012 - gmx:100527704 271.552