Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0633 ATGGATTCTTCATCATCCTTCTCAAAACAGAAACCCCAATGGATACACGATGTGTTCATCAATTTTAGGGGAGAAGACACTCGTAGGAATTTCGTTTCTTATCTCCATTGTGCCGTCTCAAATGCTGGAGTCAACACTTTCCTTGACGAGGAGAATCTACTCAAGGGAATGGAACTGAAAGAACTAATGCGAGCAATAGAAGGGTCTCAGATATCTTTGGTGGTTTTCTCCAAAACCTATACTAAATCTACTTGGTGCCTTAATGAGATTGCAAAAATCATTGAATGCCACGAAACTTATGGCCAAAAAGTTGTTcctatattttactatattgaCCCATCCGTTGTACGTCATCAGATCGATGATTATGGATTAGCTTTGAAAGCACGTGCACAAAATTTATATTCCGGAGGACATGTGGAATCTGTGCTATCGAGGTGGGGCAGCGCACTCACCAAAGCTGCGAATTTCTCTGGTTGGGATGTGAGCAATCACAGGTAA 501 0.4052 MDSSSSFSKQKPQWIHDVFINFRGEDTRRNFVSYLHCAVSNAGVNTFLDEENLLKGMELKELMRAIEGSQISLVVFSKTYTKSTWCLNEIAKIIECHETYGQKVVPIFYYIDPSVVRHQIDDYGLALKARAQNLYSGGHVESVLSRWGSALTKAANFSGWDVSNHR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0633 166 Pfam TIR domain 16 153 IPR000157 GO:0007165
Ssu2g0633 166 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 8 166 - -
Ssu2g0633 166 SMART till_3 15 157 IPR000157 GO:0007165
Ssu2g0633 166 ProSiteProfiles TIR domain profile. 14 166 IPR000157 GO:0007165
Ssu2g0633 166 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Ssu2g0633 166 Gene3D - 10 166 IPR035897 -
Ssu2g0633 166 PANTHER TMV RESISTANCE PROTEIN N-LIKE 8 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0633 Ssu-Chr2 36047752 36048252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0633 9 166 Miscellaneous Gene Families AT4G19920 32.911 5.29e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0633 - - gmx:100815297 239.195