Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0607 atgtCTCGCACTCCCAACTACGAGTTCCAGGAATGGTGGAACAAGCAGCGCGAAAAGAACCACCTCAGCCTCCTCGACGACGCCAAGCTCGACCACTCCCACTCCGCCCCGCCCTTCACGGCGCTCGACGTCGACCCCTCCTCCGCCGCCGAGGACGCCGACACCGACGCCGACCGCTCCTTCAAAAAAGAACGTTCCAGAAGCGCGCGACAGCTCTCATGGGTCTGCCTCCTCAAATTCCAACAGCTCGCCGCGTCTCTCGGGTGGCTCTCCAGCGGCCTCCTCTTCCTCGTCCGCACCGCGAACCGCCGGATCGCCGATTCGGCGTCGTTTCGCGGCGACTCGTCGCGGCTCTACCGCGCGATCCGCGTGTTCCTGATCGTGGTGATCGTTTTGTTGGGGTTCGAGCTCGTCGCGTATTTCAAAGGGTGGCATTTTAGTCCCCCCGATCCCAGCGACGTTTTGGGGATGCTTGGCGTCGTTTACGCCGCGTGGCTCGACGCCCGCGCGAGTTACCTGGCGCCGCCGTTGCAGAGTTTGGCGAATTTGTGCACCGTTTTGTTCATCGTGCAGTCGGTGGACAGGGTCGTTTTGATCTTGGGGTGCTTTTGGATCAAGTTTCGGAGGCTCAAGCCTGTGGCTAGTGTGGATTATGATGGTGCGGGTCAGAGCGTGGAGGATTTTCCGATGGTGTTGGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCCATTGGAGCAGTTTGTATCCTGGATTGGCCAAAGGAGAGAATGCTTGTACAGGTTCTTGATGATTCTGATGAAGTAGATATCCAGCAGCTCATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATAATATATAGACATCGGCTTATACGTACAGGCTACAAGGCAGGGAATCTTAAATCAGCAATGAACTGTGATTATGTTAAGGATTATGAGTTTGTGGCGATATTTGATGCTGATTTTCAGCCAACTCCGGATTTCTTAAAGAAGACAGTGCCTTATTTCAAGGGAAAGGATGATTTGGCATTAGTCCAGGCAAGATGGGCATTTGTAAACAAGGATGAAAACTTGCTTACAAGATTGCAGAACATCAATTTGTCTTTCCACTTTGAGGTTGAACAGCAGGTGAATGGTATCTTCATTAACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTTGAGGAGAGTGGTGGCTGGTTGGAGCGAACAACTGTTGAGGACATGGATATTGCTGTTCGTGCTCATCTCTGTGGATGGAAGTTCATATTTCTCAATGATGTTAAGTGTCTTTGTGAACTTCCAGAGACTTATGAGGCATATAAGAAACAACAACACCGCTGGCATTCCGGTCCAATGCAATTGTTTCGCTTGTGTTTTCTTGATGTACTTCGTTCGAAGGTTAGTTGGGCAAAGAAGGTcaatttgatatttcttttcttcctcctGAGGAAGCTTATCCTGCCATTTTATTCGTTCACCCTCTTCTGCATCATTCTTCCATTGACCATGTTTCTTCCCGAAGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCAGGAATCATGTCCATTCTAAGTGTTCTCCCAGCTCCAAGGTCATTTCCATTTATAGTTCCTTACCTTCTGTTTGAGAACACTATGTCAGTAACTAAATTTAATGCCATGATATCTGGATTATTTCGCTTTGGAAGTTCTTACGAGTGGGTGGTTACAAAAAAGTTGGGAAGATCCTCAGAGACAGATTTGGTTGCCTTCGAGAAAGAAGCTGAACCTCTAATGCGATCTACTAGTCTTCATAGATCATCCTCAGATTCGGGCATTGAGGAACTAAGCAAACTAGAGTTGTCAAAGAAAACTGGGAAGACCAAGAGAAACCGTCTCTTCAGGAAAGAACTTTATCTTGCATTTATTTTGTTGACTGCCTCAGTTAGAAGCTTGTTATCTGCCCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGGATAAGTTTTCTGGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTTAGTTGA 2076 0.4745 MSRTPNYEFQEWWNKQREKNHLSLLDDAKLDHSHSAPPFTALDVDPSSAAEDADTDADRSFKKERSRSARQLSWVCLLKFQQLAASLGWLSSGLLFLVRTANRRIADSASFRGDSSRLYRAIRVFLIVVIVLLGFELVAYFKGWHFSPPDPSDVLGMLGVVYAAWLDARASYLAPPLQSLANLCTVLFIVQSVDRVVLILGCFWIKFRRLKPVASVDYDGAGQSVEDFPMVLVQIPMCNEREVYQQSIGAVCILDWPKERMLVQVLDDSDEVDIQQLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMNCDYVKDYEFVAIFDADFQPTPDFLKKTVPYFKGKDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFLDVLRSKVSWAKKVNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGIMSILSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKEAEPLMRSTSLHRSSSDSGIEELSKLELSKKTGKTKRNRLFRKELYLAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0607 691 MobiDBLite consensus disorder prediction 38 61 - -
Ssu2g0607 691 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 446 IPR029044 -
Ssu2g0607 691 PANTHER - 35 690 - -
Ssu2g0607 691 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 507 IPR029044 -
Ssu2g0607 691 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 35 690 - -
Ssu2g0607 691 Pfam Glycosyl transferase family group 2 323 519 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0607 Ssu-Chr2 34940468 34957205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0607 1 691 Miscellaneous Gene Families AT3G07330 74.856 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0607 - - gmx:100801779 1241.87