Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0569 ATGGATCATCCTGAAGGATCTGATCAAATATTTACAGGTACTCCACAATACGAGACTCTAGAACCTGATCAATCCAAGAAACAATTGAATCAATCTAAAGGTGAGGTTGGCTACATGGATCACCCTAAAAGCTCTGACCATAAATTCAAAGGTGCACCACAACACGAGGCTCCAAAACTTGATCAATCCAAGAAACAAATGAATCAATCTAAAGGTGAAGTCGACTACATGGATCAACCTAAAGGCCCTAACCAAAAATTCAAAGGTGCACCACAACAAGAGGCTCTAGAACCTTATCAATCCAAGGAACAAATGAATCAATCTGAAGGTGAGGTTAGCTACATAGATCACCCTGAAGGCCTTGACCAAAAATTCAAAGATGCACCACCCCATGAGGCTCCAAAACCTGATCAATCCAAGaaacaaatgaatgaatttgaaGGTGAGGTTAGCTACACAAATCATCCTGAAGGCTCTGACCAAAAATTCAAACGTGTACCACAACACGAGACTCTAGAACCTGATCAATCCATGAAACAAATGAATCAATTTGAAGGTGAGGTAGGCCACAAGGATCACCCTAAAGGCCTTGACCAAAAATTCAAAGGTGCACCACAACACAAGGCTCCAAAACCTGATCAACCCAAGAAACAAATGAATCAACTTGAAGGTGACGCCACTAAAGTGGAAGATAAAATCAATGGCACAGGACTTGAAAGCTTTTCTAGAAACATTCCAGGAAACAAGAAATCAGAAGATTCACCAAGTCACTCAAGTGCAACCTCACAAGATCAAGGTAAAGGTCAAATTGCACCAAAAAAGAAACACTTTTGGAGTAATTGGGCAGTTATTGGTGATGCTTTTGAGGCCTTTATACCCAAACAACCTAAAACTAGCACTtccaaaaaaagtgaaaagcaACCAGAAATTGATCTTCCTGATGAGAAACAGCAAGAGCATATCGAGGTTAAAATTGATGAAGCTGACACAGAACCAGTCGAAGTTGTTACTCCTGCTGAAAGTACACCACTTCTTACGCGTACGGAGCCAACTCTACCATCAAGTAGTAAGAAATTGGAAATTCTTAAAAGTATTGTGTATGGTGGTTTGATTGAATCATTAGCAAGTCTTAGTGTTGTAACATCTGCAGCGAGTGCTGACGCTACCACATTGAACATTGTGGCGCTGGCTATTGCAAACCTGATTGGTGGACTTTTCGTACTTGGTCATAATCTTGAGGAACTGAAATCTGAACAAGTGGATCGATACAATGAGTTACTGGGGCAGAGGGAGAATTTCATTCTTCATGCTTTTATTGCAGTCTTATCATTCATTGTTTTTGGATTAGTGCCACCAGTGGTATATGGCTTTTCATTTCGTGAGAGTGATGACAAGGATTTCAAGGTAGCTGCTGTTGCTGGAGCTTCTCTGCTTTGCATTACTCTGCTTTCCATTGCCAAAGCATACATCAAGAGACCAAACAGCTATATGACATACTTCAAAACAGTGCTTTACTATGTCAGCACTGGTGCTGTGGCTTCAGTGCTTTCTTACTTAGCTGGTGACCTTGTGAAGAAACTCATAGAAAAACTTGGATGGTTTGAGTCAGCATcgttttggatttaa 1626 0.3967 MDHPEGSDQIFTGTPQYETLEPDQSKKQLNQSKGEVGYMDHPKSSDHKFKGAPQHEAPKLDQSKKQMNQSKGEVDYMDQPKGPNQKFKGAPQQEALEPYQSKEQMNQSEGEVSYIDHPEGLDQKFKDAPPHEAPKPDQSKKQMNEFEGEVSYTNHPEGSDQKFKRVPQHETLEPDQSMKQMNQFEGEVGHKDHPKGLDQKFKGAPQHKAPKPDQPKKQMNQLEGDATKVEDKINGTGLESFSRNIPGNKKSEDSPSHSSATSQDQGKGQIAPKKKHFWSNWAVIGDAFEAFIPKQPKTSTSKKSEKQPEIDLPDEKQQEHIEVKIDEADTEPVEVVTPAESTPLLTRTEPTLPSSSKKLEILKSIVYGGLIESLASLSVVTSAASADATTLNIVALAIANLIGGLFVLGHNLEELKSEQVDRYNELLGQRENFILHAFIAVLSFIVFGLVPPVVYGFSFRESDDKDFKVAAVAGASLLCITLLSIAKAYIKRPNSYMTYFKTVLYYVSTGAVASVLSYLAGDLVKKLIEKLGWFESASFWI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0569 541 MobiDBLite consensus disorder prediction 9 32 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 97 111 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 237 268 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 39 68 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 294 318 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 115 144 - -
Ssu2g0569 541 PANTHER GLYCINE-RICH PROTEIN FAMILY 249 536 - -
Ssu2g0569 541 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 249 536 IPR008217 GO:0005384|GO:0030026
Ssu2g0569 541 MobiDBLite consensus disorder prediction 299 318 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 158 172 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 185 214 - -
Ssu2g0569 541 MobiDBLite consensus disorder prediction 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0569 Ssu-Chr2 33224126 33227142 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0569 - - ccaj:109806064 675.626