Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0478 atGGCCAAGACAGTCATTGAGAATGTATGGTCGCTTATTGGAAGGACAGCACCACCTGATTTTCTAGCAAAGTTAACATATTTGATATGGAATCACCATGAAGAGGTTAAGCACATAGATACTGTGAGAGCATACACCTTTGGCGCTCATTACTTTGTTGAAGTAGATATCGTGTTGCCAGAAGACATGCCCCTCAACCAAGCACACAACATAGGTGAGACACTGCAAGAGAAGCTGGAGCAACTTCCTGAAGTTGAAAGAGCCTTCGTGCACATTGATTTTGAGTTTACTCACAGGCCTGAACATAAGATGATGGTATAA 321 0.4237 MAKTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKMMV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0478 106 Gene3D Cation efflux protein, cytoplasmic domain 16 94 IPR036837 -
Ssu2g0478 106 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 2 106 - -
Ssu2g0478 106 PANTHER METAL TOLERANCE PROTEIN 9 2 106 - -
Ssu2g0478 106 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 17 93 IPR036837 -
Ssu2g0478 106 Pfam Dimerisation domain of Zinc Transporter 19 93 IPR027470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0478 Ssu-Chr2 27494775 27495095 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0478 - - gmx:100811575 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1482 8 29945455 29949724 Ssu2g0478 2 27494775 27495095 PCT