Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0349 ATGCCTGAACAAAATCATGCCATCCCTCTCCTTACTCCTCACAGGATGGGGAACTTCAATCTTTCCCACAGAATCGTTTTGGCACCACTATTTAGAGCAAGATCTTACAACAGCGTTCCTCAGCCCCATACTATCCTATATTACTCTCAAAGAGCTACCAAGGGAGGTCTTCTGATTGCTGAAGCTACTGCTATTTCACCCACTTCTCAAAATCATCCAAACGCACCTGGTATATGGTCAAGAGTGCAAATCGAAGCATGGAAACCTGTTGTAGATGCTGTTCATGCCAAAGGTGGTATATTCTTCTGTCAGATTATTCATGTTGGAAGGGTTTTAGATACAGATTTTAATCCAAGTGGGCAAGCACCAATATCATCAACCAACAAACCATTGACACCTAATGGCATGGAACCAAGGCCGTTAAGGACAGATGAAATTCCTCATATTATCAATGACTTCAGAATTGCAGCAAGGAATGCTATGGAAGCAGATATAAAAACTGTTCTTGAAAGTCTACTCAACATGTTAGCATCTGATTCTTCAAAATTTGGGTAa 555 0.409 MPEQNHAIPLLTPHRMGNFNLSHRIVLAPLFRARSYNSVPQPHTILYYSQRATKGGLLIAEATAISPTSQNHPNAPGIWSRVQIEAWKPVVDAVHAKGGIFFCQIIHVGRVLDTDFNPSGQAPISSTNKPLTPNGMEPRPLRTDEIPHIINDFRIAARNAMEADIKTVLESLLNMLASDSSKFG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0349 184 MobiDBLite consensus disorder prediction 120 142 - -
Ssu2g0349 184 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 7 168 - -
Ssu2g0349 184 Pfam NADH:flavin oxidoreductase / NADH oxidase family 10 165 IPR001155 GO:0010181|GO:0016491
Ssu2g0349 184 Gene3D Aldolase class I 2 169 IPR013785 -
Ssu2g0349 184 PANTHER NADH OXIDOREDUCTASE-RELATED 7 168 IPR045247 GO:0010181|GO:0016491
Ssu2g0349 184 SUPERFAMILY FMN-linked oxidoreductases 9 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0349 Ssu-Chr2 22439034 22441098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0349 3 168 Acyl Lipid Metabolism Gene Families AT1G76690 61.932 8.06e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0349 K05894 - gmx:100816003 271.552