Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0169 ATGGCTGATTCAACCATCAAAATTCTTAGCGTAGTTCTCTTCTTTGTCCTCATTTCTCAAGGTTATAGCCAATGCTCTTTGAGTGATCTCTCCATAAGCCAATTTCAATCAGGAGTTAGAGTGCAGGGAAAGCCAGAATGGAGTGTAACTATAACCAATAAGTGCCcatgtgttcaaaagaatgtgaTCTTGAATTGTGCTGGATTTCATTCCGTTGAACGCATAGACCCTTCATTGTTGAAGGTCTCAGGAAGTGGTTGTCTTGTTAATGCTGGTTTGCCTATCTATAAAGATGttgtcaaattcaaatatgcttGGGACCGGCCATTTCAATTAAATCCCATTTCCTCAAAGATTTCTTGTTCTTAA 369 0.355 MADSTIKILSVVLFFVLISQGYSQCSLSDLSISQFQSGVRVQGKPEWSVTITNKCPCVQKNVILNCAGFHSVERIDPSLLKVSGSGCLVNAGLPIYKDVVKFKYAWDRPFQLNPISSKISCS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0169 122 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 1 122 IPR040361 -
Ssu2g0169 122 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0169 Ssu-Chr2 8659830 8660275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0169 1 121 Glycosyltransferase AT4G32110 47.967 3.01e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0169 - - ccaj:109812006 164.466