Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4263 atggagaATAGGGTAATATTACAGGAATGGTTTGACCGAGTTGACTCGGAGAAAAGTGGAAGCATAACGGCGCTGCAGCTTAAGACAGCTCTAGCTGTGGGCAACCTGGAATTTCCGCTCTCAGTGGTTGAGCAGATGATCAGGAATGGTACTATGAGCTTTGAAGGATATGAGAATATTACTGATGATAGTCTACGTAACTCTGCTTATACCACAAGATTCTTTCTTGCGACGCATTTTGATGAATTCTATGTATGTTTCCAGGCTTTGGTAAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTTTGCGAGAGCTTCGATCAAAGTAAAAATGGGAGGTTTCGGCTGGACAACTTCATATCAATCTGTATATTCTTACAATCAGCGCGGAATCTGTTTAATTCATTTGATACAGCGAAACAAGGCAGAGTTACTCTCGATCTGAATCAATTTGTCTATTGTAGTTATCAATAG 483 0.3954 MENRVILQEWFDRVDSEKSGSITALQLKTALAVGNLEFPLSVVEQMIRNGTMSFEGYENITDDSLRNSAYTTRFFLATHFDEFYVCFQALVKIGFMLDSPAFYSVCESFDQSKNGRFRLDNFISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCSYQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4263 160 PANTHER PEFLIN 6 158 - -
Ssu1g4263 160 PANTHER PEFLIN 6 158 - -
Ssu1g4263 160 Gene3D - 1 159 - -
Ssu1g4263 160 SUPERFAMILY EF-hand 6 157 IPR011992 -
Ssu1g4263 160 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4263 - - gmx:100792880 223.402