Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4262 ATGAACAACAGCAGCATTCTCATCCAATTGTTTTCCTCGCCTCCTGCATGGGCAACTATAACCGCAGCTGCATTTCTCATCCCCACTCTAGCTCTCTCCATGTATCTTTTGTTTGAGCATCTTTCCGCTTACAAGAATCCCGAGGAGCAAAAGTTCTTGATTGGGGTTATCCTAATGGTTCCCTGCTATTCTATTGAATCTTTTGTATCATTGGTCAATCCATCAATCAGTGTTGATTGCGAGATTCTAAGGGACTGCTACGAATCCTTTGCCATGTATTGCTTTGGAAGATACCTCGTTGCCTGCCTCGGCGGCGAGGAAAGGACCATTCAATTTATGGAAAGACAGGCTCGTATCTCTGTTAAAACTCCTCTTCTACAACATTCTTCTGACAAGGGCACTGTCAAGCATCCCTTTCCTATCAACTACTTCCTTAAACCCTGGAAACTCGGTCCCCACTTCTACCAAATTGTTAAATTTGGCATTGTTCAATATATGATAATCAAGGCTTTCACTGCTATTCTCGCAGTAATCCTTGAAGCCTTTGGAGTCTACTGTGAAGGAGAATTTAAACCAGCATGTGGGTATCCTTATATGGCAGTGGTTCTGAATTTCAGTCAGTCGTGGGCTTTGTACTGCCTTGTTCAATTTTACACCGTGACAAAGGATAAACTGGCTCATATAAAGCCATTGGCCAAATTTTTGACATTCAAATCAATTGTGTTCCTCACTTGGTGGCAAGGTGTGGCAATTGCTCTCCTATGCACCTTTGGTTTGTTCAAAAGTCCCATAGCTCAAGGCTTGCAGTTTAAGTCAAGCGTCCAAGATTTCATCATTTGCATTGAGATGGGCATTGCTTCCATAGTTCACCTGTATGTGTTTCCAGCAAAGCCTTATAAGCTAATGGGAGACCGCCTTCCCGGAAGTGTTTCAGTTCTGGGAGATTACTCTGCTGACTGTCCTCTGGACCCTGATGAGATTAGGGACAGTGAGAGACCCACAAAACTGCGTCTTCCTACACCGGATGTTGATACCAAGAGTGGGATGACTATTAGAGAGAGTGTTCGTGATGTTGTTATTGGTGGTGGTGGATATATTGTGAAAGATGTGAAGTTCACCGTCCATCAAGCAGTGGAGCCTGTGGAAAAGGGGATCACTAAATTCAATGAAAAACTACACAGAATCTCtgaaaatattaagaaacaTGACAAAGATGGAAGAAGAACCAAGGATGATAGTTGCATCACCTCATCATCACCTGCAAGGAGAGTGATTCGGGGAATTGATGACCCCCTCTTGATTGGGAGTGTCAGCGATAGTGGGATGTCGAGGGGGAAGAAGCACCGCCAGAAATCTGGATATACAAGTGCAGAGAGCGGAGGAGAGAGCAGTAGTGATCAAAGTTTTGGGGGCTACCAGATTAGAGGCCGTAGGTGGGTTACTAAAGAGTAA 1452 0.4394 MNNSSILIQLFSSPPAWATITAAAFLIPTLALSMYLLFEHLSAYKNPEEQKFLIGVILMVPCYSIESFVSLVNPSISVDCEILRDCYESFAMYCFGRYLVACLGGEERTIQFMERQARISVKTPLLQHSSDKGTVKHPFPINYFLKPWKLGPHFYQIVKFGIVQYMIIKAFTAILAVILEAFGVYCEGEFKPACGYPYMAVVLNFSQSWALYCLVQFYTVTKDKLAHIKPLAKFLTFKSIVFLTWWQGVAIALLCTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYKLMGDRLPGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPTPDVDTKSGMTIRESVRDVVIGGGGYIVKDVKFTVHQAVEPVEKGITKFNEKLHRISENIKKHDKDGRRTKDDSCITSSSPARRVIRGIDDPLLIGSVSDSGMSRGKKHRQKSGYTSAESGGESSSDQSFGGYQIRGRRWVTKE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4262 483 MobiDBLite consensus disorder prediction 397 421 - -
Ssu1g4262 483 PANTHER PROTEIN LAZ1 11 477 IPR031171 GO:0009626
Ssu1g4262 483 MobiDBLite consensus disorder prediction 454 471 - -
Ssu1g4262 483 MobiDBLite consensus disorder prediction 435 483 - -
Ssu1g4262 483 MobiDBLite consensus disorder prediction 397 412 - -
Ssu1g4262 483 Pfam Organic solute transporter Ostalpha 19 299 IPR005178 -
Ssu1g4262 483 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 11 477 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4262 Ssu-Chr1 103169646 103173995 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4262 - - gmx:100807030 903.279