Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4252 ATGCTTTTGAGGACAGtcTCAACTCAGGAAAATATCGCAAGCGCAAGCGCAAACATGTGGTTCATCACACCCAATCCAAGAAGCGCCTCGAACGTTCTACCGACTTCTTACAGCCTTAGACATTTTCCAACTCACAATCCCCATCCTCAAACTCCCATCTCTGCTCACCAAGGACAAACTAATACCGATCCCACCACCTATGCAAAACACGACGAAAATGATTATGATCCAAAGCTCAGTGAACTTAAAGCCACAACAAACAGTGGGCTTGAGGTAGATGAGCTTGCAATGCATTTCCAACAACCTAAGGTTTCAACAGGCAATGATCACGTGGATGGTCAATCCAAGGTGGATTGCGTGGAACCAATTCAAAGTGGGCGCTGCAGAGGAGCAAAAAGGAGAAAATCTGGTTCTGTGAAGAGGTTCAAGAAAGAGACAGATGCAGGTAAGCCTGATGATGCGCAGAATGCAATCAACGTGCCTGTTCGTGCAGTTGAACCAGGCTGCACCAGAATTGCTGGTTGTATGGGGAATAATAGTCCTATGAAGATGGGTGATGCTAAAACTGCCTGCAATATTGTCAAGATTATAAAGCCAATAGGCTATTCAGCTTCTTTATGTGACAACATACAAGATGTTTTAGTGACCTTTATGGCCATGAGGTCTGATGGAACAGAAGTGATGGTGGATAACAAATATCTCAAGGCATACAATCCACTTCTGCTGATCAGTTTCTATGAGTTGCATCTCCGATATAGTCCTACATCGTGA 771 0.441 MLLRTVSTQENIASASANMWFITPNPRSASNVLPTSYSLRHFPTHNPHPQTPISAHQGQTNTDPTTYAKHDENDYDPKLSELKATTNSGLEVDELAMHFQQPKVSTGNDHVDGQSKVDCVEPIQSGRCRGAKRRKSGSVKRFKKETDAGKPDDAQNAINVPVRAVEPGCTRIAGCMGNNSPMKMGDAKTACNIVKIIKPIGYSASLCDNIQDVLVTFMAMRSDGTEVMVDNKYLKAYNPLLLISFYELHLRYSPTS 256
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4252 256 MobiDBLite consensus disorder prediction 43 66 - -
Ssu1g4252 256 MobiDBLite consensus disorder prediction 43 74 - -
Ssu1g4252 256 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 55 255 - -
Ssu1g4252 256 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 55 255 IPR044251 GO:0006325|GO:0031507
Ssu1g4252 256 MobiDBLite consensus disorder prediction 130 154 - -
Ssu1g4252 256 SMART ChS_2 182 255 IPR008251 GO:0005634
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g4252 Ssu-Chr1 103026048 103029684 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4252 - - vun:114164029 333.569