Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4246 ATGAGTGCCGTGAACATCACGAACGTCACCGTCTTGGACAACCCTGCTTCCTTTCTTACCCCCTTTCAGTTTGAGATTTCCTACGAGTGTCTCACCGCTCTCAAAGATGATTTGGAATGGAAGCTTATTTATGTTGGATCTGCTGAGGATGAGACTTATGATCAATTATTAGAGAGTGTCCTTGTTGGTCCTGTCAATGTTGGAAACTATCGCTTTGTTTTACAGGCAGATCCACCAGATCCATCAAAGATTCGTGAAGAAGATATAATTGGTGTCACAGTGCTTCTGTTGACCTGCTCTTACCTGGGTCAGGAATTTATTCGTGTTGGCTATTATGTGAACAACGATTATGATGATGAGCAGCTGAGAGAGGAACCTCCACCAAAGGTTTTAATTGATAGGGTTCAAAGGAACATTTTGTCTGATAAACCAAGGGTCACAAAGTTCCCCATCAATTTCCACCCTGAGAACAATGAAAATGAAGAGCAAGCCCCTCCGTCCGAGCACCCATCTGAAACTGGAGAAGATCCACTTGCCGTAGTTGATCGTGATCCCCCAGCTGAGAAGGATTCTTAA 576 0.4392 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQAPPSEHPSETGEDPLAVVDRDPPAEKDS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4246 191 SUPERFAMILY ASF1-like 1 153 IPR036747 GO:0005634|GO:0006325
Ssu1g4246 191 Gene3D - 1 157 IPR036747 GO:0005634|GO:0006325
Ssu1g4246 191 MobiDBLite consensus disorder prediction 161 191 - -
Ssu1g4246 191 Pfam ASF1 like histone chaperone 1 153 IPR006818 GO:0005634|GO:0006325
Ssu1g4246 191 MobiDBLite consensus disorder prediction 146 191 - -
Ssu1g4246 191 PANTHER HISTONE CHAPERONE ASF1B-RELATED 1 176 - -
Ssu1g4246 191 PANTHER ANTI-SILENCING PROTEIN 1 1 176 IPR006818 GO:0005634|GO:0006325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4246 K10753 - gmx:100801694 375.555