Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4242 ATGGAGGAAGACAGAGAGTGGAGCGTGAAGAAGAATGGAACCGCGACGCGACCATCTCTAAAATCCGATTCTCCACTCAACAAATATCAATTATGGAAGCAGAAGTTGAGGGACAATTGCTACAAAAGGGTGAGAGAAGACAGAACTCGCTTACTCTGGAAATTCAGATGCAATCAACAGGAGGATGTTGTCAAGTCTGCATTCCAGGATATTGTATCGGATGAATtcaacaaaatgaaaaacacGGATGAGCTGTTATGGGAGTATGAAGGTCCTCCTGATACTACTTACCAGGGTGAATGTGAAGACATACTGTTAGAAATGCAAAGGATATTTTATGAAGATCTCAAATCCCAACCACCCATACAAGATTTAGAAAGCGATATTGAAACTTGGGAGGATGAAGTAGATGAGTACTTGGCTGGTGCAGTTTATGAGCATATGCAGCTAAATGCAGATGAGGCCCATGGGAAAGAGATTTGGTGTCCTATTTGTAAGCAAGGAGAGCTTAAAGACAGTCACAATCTTATATACTGCACTCGTTGTGAACTTCAACTAAACAAAGCTAGTGAGCTTACTTTGGACTTTTTGCGGGACCGGCTGGCTGAAGTCCACACAGAGCATCTTGACAGAGGCTGCAGATTGAAACCCAAATTTTGTATGAAGACAAAGTTTAATTTAACTGCATTGTACATTTCATGTGAAGGTTGTGATACATTTGAGGTTGTAATTTAA 735 0.4014 MEEDREWSVKKNGTATRPSLKSDSPLNKYQLWKQKLRDNCYKRVREDRTRLLWKFRCNQQEDVVKSAFQDIVSDEFNKMKNTDELLWEYEGPPDTTYQGECEDILLEMQRIFYEDLKSQPPIQDLESDIETWEDEVDEYLAGAVYEHMQLNADEAHGKEIWCPICKQGELKDSHNLIYCTRCELQLNKASELTLDFLRDRLAEVHTEHLDRGCRLKPKFCMKTKFNLTALYISCEGCDTFEVVI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4242 244 Pfam Replication protein A interacting C-terminal 161 242 IPR028159 -
Ssu1g4242 244 PANTHER RPA-INTERACTING PROTEIN RPAIN 13 244 IPR028156 -
Ssu1g4242 244 Pfam Replication protein A interacting middle 66 144 IPR028155 -
Ssu1g4242 244 Pfam Replication protein A interacting N-terminal 29 56 IPR028158 -
Ssu1g4242 244 MobiDBLite consensus disorder prediction 1 23 - -
Ssu1g4242 244 Coils Coil 122 142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4242 - - gmx:100789343 437.958