Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4236 ATGCTAACAAATCACGAGGACAAAGTTGCTTCTCATAATGTTGTTCCAATCATCCATGTTGATGACACTGAAGAAGCACTTACTCCTTCAGCTGGTGGATCTATACATTCTAGCCTCTCTGGTACTCCCCGCGGAAATGAAGGAAGTGATGGAGAGATCGAGTCTGTGACTTCTGAACCCCGTCTTCAAGTTGGAAgttatcaaataaaagaaagttttgctTCCATCTTGCATTCTATCCTTGACAAGTACGGGGACATAGGTGCAAGCTGTCACTTGGAATCAGTTGCGGTGCGCTCATATTACATTGAGTGTGTATGCTTTGTGGTGCAAGAGTTACAATCCGCCTCAATAATGCAATTAAGTAAGTCCAAAGTCAAAGAATTATTGGCTATTATTAAGGATGTAGAGTCTGCTCAACTTCGTGTGGCGTGGTTGCGTAGCGCCCTCGATGAGCTAGCTGAAAATATTGAACTCATTAACCACCACCAGGAGGTAGAGGCAGAAAAGGATAACTCTGGTCGCCAAGTGGAGTCACTGAGAGAAGAGCTAGAATCAGAGTTGGAAACTTTGGCTCAGAAAGAACAAGAGGTTGCTAATATTAAAACACGAATTCCTCAGATCACGGGGCGTTTGAGCGAGCTCGAGCTCCAGGCTTCTGAACTGAACAAAAGCATGCTGTCTATCAAGTCCAAGGTTGATAATTTGCATATCAAATCGTTGGTAGATGAACTATTATAA 741 0.4224 MLTNHEDKVASHNVVPIIHVDDTEEALTPSAGGSIHSSLSGTPRGNEGSDGEIESVTSEPRLQVGSYQIKESFASILHSILDKYGDIGASCHLESVAVRSYYIECVCFVVQELQSASIMQLSKSKVKELLAIIKDVESAQLRVAWLRSALDELAENIELINHHQEVEAEKDNSGRQVESLREELESELETLAQKEQEVANIKTRIPQITGRLSELELQASELNKSMLSIKSKVDNLHIKSLVDELL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4236 246 MobiDBLite consensus disorder prediction 30 45 - -
Ssu1g4236 246 PANTHER BNAA07G03350D PROTEIN 6 246 - -
Ssu1g4236 246 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 50 243 IPR007942 -
Ssu1g4236 246 Coils Coil 212 232 - -
Ssu1g4236 246 Coils Coil 136 156 - -
Ssu1g4236 246 PANTHER OS06G0711100 PROTEIN 6 246 - -
Ssu1g4236 246 MobiDBLite consensus disorder prediction 29 57 - -
Ssu1g4236 246 Coils Coil 163 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4236 Ssu-Chr1 102806535 102807275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4236 - - pvu:PHAVU_009G118800g 313.538