Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4234 ATGGCTGATCCACAGCCGCTGCTGCTGAACGATTCCGAGCCAACTCAGTTTCAAAAGGCCAGAGCTACTACCCGAGTCGCCTCCCTTGACGTCTTCCGCGGCCTCTCTGTTTTTCTTATGATATTGGTGGACTATGGGGGTTCCATTCTCCCCATCATTGCGCATGCCCCCTGGAATGGGATTCGCTTGGCCGATTTCGTCAtgcctttttttctctttattgctGGAATTTCTCTTGCACTTGTTCATAAGAGAAGGCCTCAGAGAACAAAAGCTACATTGCAAGCTTTAACTAGAGCGGTGAAACTCTTTGCTCTTGGTATTGTTCTTCAAGGTGGCTATTTTCACGGAATAACTTCCTTGACTTTTGGTGTTGACATTGAAAGAATTCGATGGCTGGGCATTTTGCAGAGGATATCTATTGGATACATTGTTGCAGCTTTATGCGAGATCTGGCTTCCAGCTCCACGATGTAAAGAATTCGGTTTCTTCAAAAGTTATTACTGGCATTGGTTTGTTGCAGTAATGTTGTTGGCACTTTACTCGGCATTACTGTATGGTTTGTATGTTCCAGATTGGCAGTTTGATGTATCAGCCTCAACCTCTTCATTGGCTCCTATTGGTGGTGGTGATATTTACACGGTGAATTGTTCAGTGAGAGGGGATCTTGGACCTGCCTGTAATTCTGCTGGAATGATTGATCGCTATATTCTTGGTCTTGACCATCTGTATAGAAAGCCTGTTTACAGAAACCTTAAGGAGTGCAACATGTCTGGTGAGCGTCAAGTTTCAGATAGTTCACCTTCGTGGTGTCATGCTCCTTTTGATCCAGAAGGCATTTTGAGCTCCATAACAGCTGCGGTTTCATGCATAATTGGACTTCAATATGGTCACGTTCTTGCCCATCTACAGGACCACAAAGGGCGCCTAGACAACTGGATGCGTTTTTCCCTTTCATTTTTGGCTCTTGGATTGTTCCTAGCCTTAATAGGAATTCCTCTAAACAAATCGCTGTACACAGTCAGTTATATGCTACTAACTTCTGCAGGTTCTGGTCTCACATTCATGGCTTTATATGTTCTGGTAGATGTTCATGGACACAGGCTTTTGACAGCTGTGTTCGAGTGGATGGGAAAGCACTCTTTGAGTATATTTGTCCTTGTGTCTTCAAACTTGGTCGTGATTGCTATTCAAGGATTTTATTGGACTAAACCCGAAAACAACATTATACACTGGATTGTGACACGTTTTGACCACACATAA 1263 0.4307 MADPQPLLLNDSEPTQFQKARATTRVASLDVFRGLSVFLMILVDYGGSILPIIAHAPWNGIRLADFVMPFFLFIAGISLALVHKRRPQRTKATLQALTRAVKLFALGIVLQGGYFHGITSLTFGVDIERIRWLGILQRISIGYIVAALCEIWLPAPRCKEFGFFKSYYWHWFVAVMLLALYSALLYGLYVPDWQFDVSASTSSLAPIGGGDIYTVNCSVRGDLGPACNSAGMIDRYILGLDHLYRKPVYRNLKECNMSGERQVSDSSPSWCHAPFDPEGILSSITAAVSCIIGLQYGHVLAHLQDHKGRLDNWMRFSLSFLALGLFLALIGIPLNKSLYTVSYMLLTSAGSGLTFMALYVLVDVHGHRLLTAVFEWMGKHSLSIFVLVSSNLVVIAIQGFYWTKPENNIIHWIVTRFDHT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4234 420 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE ISOFORM X1 1 415 - -
Ssu1g4234 420 PANTHER LD22376P 1 415 - -
Ssu1g4234 420 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 25 149 IPR012429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4234 Ssu-Chr1 102771968 102776681 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4234 - K10532 gmx:114255746 734.947