Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4232 ATGGGCCGTTTTATTTTAAGGGAAGAATCTGTGCTGAGGGGATTCATTTGTGTTTGGCCGTTTTATTATTTCATGGATAGGCTTCTATCATCGTCTTCATCCCCTACCCCTACTTTGAAAACTTTCAAGTCTTTCACATTTCTCAGTCGATTTGAATCTGCAACTGCAAGATTCAATTTCTCTCCATCAACACGTTCTGATTTGAAGCGGGTCACCTCAATTTGTTGCAAGCATGAAAACCCATCTCCTTTTTCGTCTTCCACTCCCTTTCTCGCTTCTTCCCTGCACCCCAATAATTTTCAACCCGTTTCCTCTTCTCCAGATCGGTTCACACCTGAATCCCATGCTCTCAATCAAATCAAAACTGGGGCTATCCAAAAGCCAAAGGCAATAACAGCTCGGACACTTGTAATACTCTCTGTTCTTGCTGTGATCTTAGTCCAACCAGCTATTGCACCGGCAGCTTTTGCAACCTTTCAAACTGCTGCCAAGACCGGTGGTCCTGCTGCTGCAGCAATTGGTAGAAAACTAATCCACACTGAGCTCCTAAGTAGTGCTTGGACTGGTTTCTTAGCTGGCTGCTTGCACACGCTATCAGGGCCTGACCACCTAGCTGCCTTGGCTCCCTTGTCAATTGGTCGTACCCGAATGGAGAGTGCTGCCGTTGGAGCCCTTTGGGGTTGTGGCCACGATGCCGGTCAGGTTATCTttggcttaatatttttaatcctgAAGGATCAACTTCATATTGAGATTATCCGAACTTGGGGCACCAGAGTGGTGGGTCTTACCCTGCTAATAATTGGGGCTATGGGAATTAGAGAAGCTTCAGAAGTACATACCCCACGTGTTGCTTTAGAAAGTGGTGAATGTGATGTCAACGTGTATGAATCACTTGATAATCCAACAGTAGGCAGAAAAAAGATTGGTTTTGCTACTTTTGCCACAGGGATAGTTCATGGACTGCAACCAGATGCTTTGATGATGGTGTTACCTGCCCTTGCTTTGCCTTCTCGTTTGGCTGGTGCTGCATTTCTCATCATGTTCTTAATTGGAACTGTAATTGCAATGGGAAGCTATACGGTTTTTATTGGTTCATGTAGCCAGGCACTAAAGGATAGGGTACCCAGGATAACTGAGAAGCTCACTTGGGCTTCTTCCCTTATTGCAATAGCGCTTGGATTTGCTATCATTATTAGCCAGTTTTTTGGGTTTAGTCTTTATTAA 1227 0.4417 MGRFILREESVLRGFICVWPFYYFMDRLLSSSSSPTPTLKTFKSFTFLSRFESATARFNFSPSTRSDLKRVTSICCKHENPSPFSSSTPFLASSLHPNNFQPVSSSPDRFTPESHALNQIKTGAIQKPKAITARTLVILSVLAVILVQPAIAPAAFATFQTAAKTGGPAAAAIGRKLIHTELLSSAWTGFLAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLIFLILKDQLHIEIIRTWGTRVVGLTLLIIGAMGIREASEVHTPRVALESGECDVNVYESLDNPTVGRKKIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLIMFLIGTVIAMGSYTVFIGSCSQALKDRVPRITEKLTWASSLIAIALGFAIIISQFFGFSLY 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4232 408 PANTHER EXPRESSED PROTEIN 25 408 - -
Ssu1g4232 408 PANTHER UNNAMED PRODUCT 25 408 - -
Ssu1g4232 408 Pfam Cytochrome C biogenesis protein transmembrane region 235 380 IPR039447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4232 Ssu-Chr1 102739719 102742047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4232 - - gmx:100818218 610.527