Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4229 ATGGGTGCTCTGGATCACATCTCTGAGCTCTTTGACTGCTCCCATGGCAGTTCCAAACTCAAGAAGCGCAAGCAATTGCAGACGGTGGAGGTGAAAGTGAAGATGGACTGCGAAGGTTGCGAGAGGAAAGTGAGGAAGGCGGTGGAGGGGATGAAAGGGGTGAACGAGGTGGAGGTGGAGCGGAAGGCGAGCAAAGTGACAGTTGTGGGGTACGTGGAGCCCTCTAAGGTGGTTGCCCGCATCGCTCACCGCACCGGCAAAAGAGCAGAGCTCTGGCCATATGTCCCCTACGACGTCGTTGCTCACCCCTACGCGCCCGGAGTCTACGATAAGAAAGCCCCCTCCGGTTACGTCCGCAACACCGATGACCCTCACTATTCCCATCTCGCACGTGCCACCTCCACCGAGGTCCGCTACACCACCGCTTTCAGCGACGAGAACCCCTCCGCTGTGTCGTTATGTGACCCTTTGAGTCTTCCAAAACTGTTGTAG 492 0.5732 MGALDHISELFDCSHGSSKLKKRKQLQTVEVKVKMDCEGCERKVRKAVEGMKGVNEVEVERKASKVTVVGYVEPSKVVARIAHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGYVRNTDDPHYSHLARATSTEVRYTTAFSDENPSAVSLCDPLSLPKLL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4229 163 ProSiteProfiles Heavy-metal-associated domain profile. 35 91 IPR006121 GO:0046872
Ssu1g4229 163 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 153 IPR045181 GO:0046872
Ssu1g4229 163 Gene3D - 15 93 - -
Ssu1g4229 163 CDD HMA 30 90 IPR006121 GO:0046872
Ssu1g4229 163 Pfam Heavy-metal-associated domain 31 86 IPR006121 GO:0046872
Ssu1g4229 163 SUPERFAMILY HMA, heavy metal-associated domain 26 93 IPR036163 GO:0046872
Ssu1g4229 163 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 2 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4229 Ssu-Chr1 102689839 102690432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4229 - K10752 gmx:100780624 292.737