Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4211 ATGGCATCGGAGAAAGAGGTTGAAACTGTAATGGTTGGGAACTATGAGGAAATGGAAACTGAAGGGAAGCCTAAAGATATAAAATCCAGGTTATTAAGCTTCTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGgtGGCTCAAGTTCTGCTTACGTTACCGTACTCATTTTCCCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACAGCTTGCTGGGTGGCTGGACGGCTTACCTTATTAGCGCACTCTACATTGAATACAGAAccagaaaagagagagaaaaatttaatttcaggaACCATGTCATCCAGTGGTTTGAGGTTCTTGATGGGCTCCTGGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATTCAACTGATAGCTTGTGCAAGcaacatatattacataaatgaTAATTTGGATAAGAGGACTTGGACTTATATCTTTGGAGCATGCTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTATCTCACTGTTGCCTCTCTCCTTCACGGCCAGGTGGAAGGGGTTAAGCATTCGGGTCCGACCaaattggttttatattttactgGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAGCCTAAAAAATTCAAGGCCATATACTTACTGGCTACCCTGTACGTGCTGACATTGACGCTTCCATCCGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAACGCTTTTTCTCTCCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCATGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATTCACGAGTGTAGGAGCCTGTGCAAGCGTGCTTTGGCGAGATTGCCAGTGGTGATCCCCATATGGTTTTTGGCCATAGTTTTCCCCTTTTTTGGCCCCATCAACTCCACCGTTGGATCTCTGCTTGTCAGCTTCACTGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCCCCCGCTGCCCGACaggtattaattattaaatcatctCATGTGCTACAATTtgaataa 1245 0.4329 MASEKEVETVMVGNYEEMETEGKPKDIKSRLLSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYSLLGGWTAYLISALYIEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPKKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARQVLIIKSSHVLQFE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4211 414 Pfam Transmembrane amino acid transporter protein 37 402 IPR013057 -
Ssu1g4211 414 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 404 - -
Ssu1g4211 414 PANTHER OS05G0424000 PROTEIN-RELATED 3 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4211 Ssu-Chr1 102380356 102384633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4211 3 401 Organic Solute Cotransporters AT2G21050 88.221 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4211 K13946 - gmx:100806531 804.283