Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3744 ATGAAGCGTCCTCTTCCGTCGGCGAGCggcgacgacgacgacgactaCGGGAAGATGAAGAAGGCGAAGGCGGTGCAAAACGACGACGAAGAGCGCGTGGATGGAAACAGCGACGGGCTCGCGTGTTTCGACGACAATCTTCTGTTCGAGGTGCTGAAGCACGTGGACGCGAGGACGCTGGCGAAGGCGGGTTGCGTGAACAAACAGTGGCACAAAACGGCGCTGGACGAGAGGCTCTGGGAACTGATCTGCACGAAGCAGTGGGCGAACACTGGGTGCGGGGAGCAACAGCTGCGATCCGTGGTCCTCGCGCTCGGTGGCTTCCGTCGCCTCCACGCGCTTTATCTCTTCCCTCTCTCCAAGCCTCAAACACcatcttcctcctcctcctcctcctcgtcGTACTGGGGTCCCATACCGCAGGTTATTCGATCGAAGCCGCTGCGACGTTTGGGGAAAGACGAGGTTCACGTCTCTCTTTCGCTCCTCTCTATCCGCTACTACGAGAAGATGAGGAATTTCAATAACGGAACATGA 537 0.5289 MKRPLPSASGDDDDDYGKMKKAKAVQNDDEERVDGNSDGLACFDDNLLFEVLKHVDARTLAKAGCVNKQWHKTALDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHALYLFPLSKPQTPSSSSSSSSSYWGPIPQVIRSKPLRRLGKDEVHVSLSLLSIRYYEKMRNFNNGT 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3744 178 Gene3D - 27 136 - -
Ssu1g3744 178 SMART fbox_2 43 83 IPR001810 GO:0005515
Ssu1g3744 178 PANTHER F-BOX PROTEIN GID2-LIKE 16 172 - -
Ssu1g3744 178 Pfam F-box-like 46 86 IPR001810 GO:0005515
Ssu1g3744 178 SUPERFAMILY F-box domain 37 89 IPR036047 GO:0005515
Ssu1g3744 178 PANTHER F-BOX ONLY PROTEIN 48-RELATED 16 172 IPR045118 GO:0019005|GO:0031146
Ssu1g3744 178 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3744 Ssu-Chr1 93925890 93926426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3744 K14495 - gmx:100527591 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3744 1 93925890 93926426 Ssu1g3744 1 93925890 93926426 ECH