Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3728 atgagttggtGGTGGGCTGGAGCAATCGGCGCTGCGAAGAAAAAATTCGAGGAAGACGAAGCGCCGCGAAGCTTCCAGAGCGTGGGGCTGGTGATCGGCGTGACGGGCATCGTGGGCAACAGCCTCGCCGAGATCCTCCCTCTGGCGGACACCCCCGGCGGCCCGTGGAAAGTCTACGGCGTGGCACGGCGCCCCCGGCCGGCGTGGAACGCCGACCACCCCGTCGAGTACATTCAGTGCGACGTCTCCGATCCCGGCGACGCCGAAACCAAACTCTCCGCGTTAACCGACGTCACCCACATCTTCTTCGTCTCGTGGACCAACTGCTCCACCGAGGTCGAAAACTGCGAAGTCAACGGCGCTATGCTACGGAACGTGCTGCGCGCCGTTATCCCCAACGCCCCCGATCTCCGCCACGTGTCCCTCCAGACCGGCGGCAAGCACTACATCGGACCCTTCGAACTCCTGGGCAAGATCGCGTCCCACGAGCCTCCGTTCACGGAGGATCTGCCGCGTTTGGACGCGCCCAATTTCTATTACACGCAAGAGGACATCCTCTTTGAAGAAACCGCGAAGAAAGAGGGCTTAACGTGGTCCGTTCACAGACCCCAAGCGATCTTCGGGTTCTCTCCCTACAGTTTAATGAACCTGGTCGGGACTCTCTGCGTTTACGCCGCTGTTTGCAAGCACGAGGGGCTTCCGTTGAGATTCCCCGGCACGAGGGGCGCGTGGGAGTCTTATTCCGTTGCCTCCGACGCGGATTTGATTGCGGAGCAGCACATTTGGGCCGCGGTGGACCCCTACGCGCGGAACGAGGCCTTTAACTGCTCCAATGGGGATGTGTTCAGGTGGAAGCAGCTTTGGAAGGTTTTGGCGGAACAGTTTGGGATTGAGGATTATGGTTTTGAGGAAGGTTCGAGTTTGAAGCTGTCGGAGCTGATGAAGGACAAGGGTCCTGTTTGGGAGGAGATTGTGAGTGAGAATGAGCTTCTGCCTACTAAGCTTCATGAGGTTGGGGATTGGTGGTTTGCGGATATTATGTTCTCGGGGGAGGGAATGTTAGATAGCATGAACAAGGCTAAAGAACATGGGTTTTTGGGATTCAGGAACTCCAAGAATTCGTTCGTGAGTTGGATAGATAAGACCAGGGCTTATAAGATTGTGCCTTGA 1170 0.5684 MSWWWAGAIGAAKKKFEEDEAPRSFQSVGLVIGVTGIVGNSLAEILPLADTPGGPWKVYGVARRPRPAWNADHPVEYIQCDVSDPGDAETKLSALTDVTHIFFVSWTNCSTEVENCEVNGAMLRNVLRAVIPNAPDLRHVSLQTGGKHYIGPFELLGKIASHEPPFTEDLPRLDAPNFYYTQEDILFEETAKKEGLTWSVHRPQAIFGFSPYSLMNLVGTLCVYAAVCKHEGLPLRFPGTRGAWESYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKQLWKVLAEQFGIEDYGFEEGSSLKLSELMKDKGPVWEEIVSENELLPTKLHEVGDWWFADIMFSGEGMLDSMNKAKEHGFLGFRNSKNSFVSWIDKTRAYKIVP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3728 389 Gene3D - 27 389 - -
Ssu1g3728 389 CDD 5beta-POR_like_SDR_a 28 328 - -
Ssu1g3728 389 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 1 389 - -
Ssu1g3728 389 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 1 389 - -
Ssu1g3728 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 299 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3728 Ssu-Chr1 93633874 93635134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3728 K22419 - gmx:100813467 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3728 1 93633874 93635134 Ssu1g3728 1 93633874 93635134 ECH