Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3698 ATGCAACAACCCTCATCAGaGATCAACGTCAGTATGCATAATTTAGCACAAAGTACCTACAACGATGGGTTTGGTGTGTGTGCAATGGTACCTAGTACAGTAGAAGAGcgcttttgttttttgatttgcTACCCTAATAGACGCGAGTCCATTGCTATTCCTTGTTCGTCACTTCGTCTCATAGGCAAGaaggaaggaaggaaaatGGTGTTTGGGCAAGTAGTAGTTGGTCCTCCTGGCTCTGGCAAAACAACTTACTGCAATGGCATGTCTCAGTTTCTCAGTCTTATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCTGCTAATGATTCATTGCCCTATGAATGTGCTGTGAACATTGAGGATCTTGTGAAACTAAGTGATGTAATGGTGGAACATTCGCTTGGTCCAAATGGGGGTCTTGTGTATTGTATGGATTATCTAGAGAAAAATATTGACTGGCTGCAAGCAAAATTGGAACCTCTTCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGaactcttttttcttcattcaaatGCCAAGAATGTCATCATGAAACTCATaaagaaattgaacctaaggTTAACTGCAGTACACTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGCTTTTATCCTTGTCCACAATGTTACATCTAGAACTCCCTCACATAAATGTCTtgtcaaaaattgatttaattgagAGCTATGGAAGGCTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTACAACACCTTCTTGATCAGGATCCTCGCTCTGCTAAGTACAGAAAACTCACAAAGGAACTATGTGATGTTATTGAAAACTTCGGTCTTGTGAGTTTTACAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTATATATTTGCTGGCATAGAAGCAAGTGCAGTTGAATTTAGCAAGATTGCAATTAGTCCTGTTGATTGGGATTATTATAGAGTTGCAGCAGTGCAAGAGAAGTACATGAAGGATGatgaaaatattgattataatgaaTGA 1110 0.3613 MQQPSSEINVSMHNLAQSTYNDGFGVCAMVPSTVEERFCFLICYPNRRESIAIPCSSLRLIGKKEGRKMVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLQAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVIMKLIKKLNLRLTAVHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGRLAFNLDFYTDVQDLSYLQHLLDQDPRSAKYRKLTKELCDVIENFGLVSFTTLDIQDKESVGNLVKLIDKSNGYIFAGIEASAVEFSKIAISPVDWDYYRVAAVQEKYMKDDENIDYNE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3698 369 CDD GPN2 71 320 - -
Ssu1g3698 369 Gene3D - 72 332 IPR027417 -
Ssu1g3698 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 323 IPR027417 -
Ssu1g3698 369 Pfam Conserved hypothetical ATP binding protein 75 323 IPR004130 -
Ssu1g3698 369 PANTHER XPA-BINDING PROTEIN 1-RELATED 69 362 IPR004130 -
Ssu1g3698 369 PANTHER GPN-LOOP GTPASE 2 69 362 IPR030231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3698 Ssu-Chr1 93218914 93223749 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3698 K24104 - gmx:100781338 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3698 1 93218914 93223749 Ssu1g3698 1 93218914 93223749 ECH