Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3696 ATGGCCGAGGGCGGTGACAAAGACCATTCTGAtgccggtggtggtggtggtggcagcaacaaAAAGTCACAGTCTCAAGAGGTTCAGGTTCAACCACACCCAGTGAGAGAGCAATTACCTGATGTTCAGTATTGCATTAACAGTCCTCCTCCTTGGCGTATTGAAGCAGTGGCATTGGGATTCCAGCATTATATTCTGACTCTTGGCATGACCGTTCTGATTCCAACTATAATTGTTCCTGAAATGGGTGGAGGCAATGCTGAGAAGGCCAAGGTGATACAGAATCTATTGTTTGCTTCTGGAGCAGGCACACTTGTGCAATCTTGGTTCGGAACAAGATTGCCAACTGTAGTTGTTGGTTCATACACTTACGTAATACCCACAATGTCAATTGTCTATGCTAAGAGATACAGTTCATATACAGATCCTTATGAGAGGTTCACTCACACAATTAGAGGGATACAAGGCGCCTTGATCATAAGTGCATGTTTCCATATAGCTATGGGATTCTTGGGCCTTTGGAGGAGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTAGTCCCTTATGTAACTTTCACTGGACTCGGTCTCTATCATCTTGGATTCCCAATGGTAAAAAAAATTTTAAATCCgttatttcttattcttaaattGTGGTCCATAATGTGTTTATTATCTTCTATGCTCCTGCAGTatcttaatcattttattagCACCAAGAAGCCTATATATGACCGATTTGCGGTGTTGTTTTCCATTGCAAGTGCATGGTTATTTGCACAGATTCTGACTTCAAGCACTGTATATAACAACAAGCCAGCAAGTACTCAGAATAGTTGCCGCACTGATCGTGCAGGTCTTATTAGTGCTGCTCCATGGGTATATCTCCCTTTTATACCCTTCCAATGGGGGAGGCCTACCTTCAACTGCGGAGAAGCTTTTGCTATGATAGCAGCTtcctttgtttctctttttgagTCTACTGGTACATTTTATGCTGCAGCAAGATATGGAAGTGGAACACCCGTGCCACCACATGTTATCAGCCGCGGAACTGGCTGGGTGGTAAGATGCACTATATTTTGTAATTCTTTCTGGAATCATAAACAAGGAAACTTACAATTGATTTTTGGAGAATGCTGGATTATTGGCATTGACAAGGGTGGAAGCCGAAGAGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCTATATTTGGAAAATTTGGAGCAATTTTTGCTTCTATACCTTTGCCAATCATGGCAGCATTAAACTGTGTATTCTTCGGCTATGTCTCTTCTGCGGGTCTTGGTTTTCTCCAGTTCTGCAACCTCAACAGTTTCAGAACCAAATTCGTGTTGGGCTTGTCATTCTTCCTCGGCATCTCCATACCACAATATTTCATAGAATATTATCATGTAAAGCATCATGACGGATGGTTCAATGATATGGTTACCGTGATCTTCATGTCGCACACAACAGTGGCTGCGTTGGTTGCATTCATTTTGGACATCACACTCTCACGTGAAGATGATGCAGCCCGTAAGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGTCGGAACGATGATTTCTATAAATTACCATGCAGAATGAATGAGCTCTTCCCCGCCCTTTAA 1662 0.4061 MAEGGDKDHSDAGGGGGGSNKKSQSQEVQVQPHPVREQLPDVQYCINSPPPWRIEAVALGFQHYILTLGMTVLIPTIIVPEMGGGNAEKAKVIQNLLFASGAGTLVQSWFGTRLPTVVVGSYTYVIPTMSIVYAKRYSSYTDPYERFTHTIRGIQGALIISACFHIAMGFLGLWRSAVRFLSPLSVVPYVTFTGLGLYHLGFPMVKKILNPLFLILKLWSIMCLLSSMLLQYLNHFISTKKPIYDRFAVLFSIASAWLFAQILTSSTVYNNKPASTQNSCRTDRAGLISAAPWVYLPFIPFQWGRPTFNCGEAFAMIAASFVSLFESTGTFYAAARYGSGTPVPPHVISRGTGWVVRCTIFCNSFWNHKQGNLQLIFGECWIIGIDKGGSRRVIQISAGFMIFFSIFGKFGAIFASIPLPIMAALNCVFFGYVSSAGLGFLQFCNLNSFRTKFVLGLSFFLGISIPQYFIEYYHVKHHDGWFNDMVTVIFMSHTTVAALVAFILDITLSREDDAARKDSGLQWWEKFSVYNADGRNDDFYKLPCRMNELFPAL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3696 553 MobiDBLite consensus disorder prediction 17 32 - -
Ssu1g3696 553 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 16 552 - -
Ssu1g3696 553 MobiDBLite consensus disorder prediction 1 33 - -
Ssu1g3696 553 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 16 552 - -
Ssu1g3696 553 Pfam Permease family 385 469 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu1g3696 553 Pfam Permease family 56 351 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3696 Ssu-Chr1 93186171 93190100 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3696 29 552 Organic Solute Cotransporters AT1G65550 57.757 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3696 - - gmx:100800316 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3696 1 93186171 93190100 Ssu1g3696 1 93186171 93190100 ECH