Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3687 ATGCTGTCATTGCTATGCACATGTGGGGCAAGCACTGGCGGCAACCTCCACCCTTTGATTCTAATACCTGGTAACGGAGGGAACCAACTAGAAGCCAGGTTGACCACTCAGTACAAGCCTTCTAGCTTCATCTGCGAGTCGTGGTACCCttttgtcaagaaaaagaaaggatggTTCAGACTGTGGTTTGATTCTAGTGTCCTACTTGCTCCTTTCACTCAATGTTTTGCTGAGCGCATGATGCTTCACTACCACCCACAACTCGATGATTACTTCAACACCCCTGGGGTTCAGACCCGGGTCCGTCACTTTGGCTCTACACACTCCCTTCTTTATCTCAATCCTCGACTCAAGCATATCACCGGATACATGGCACCCCTGGTAGATTCATTACAACAGCTTGGTTATGTTGATGGTGAAACTCTGTTTGGAGCCCCCTATGACTTTCGATATGGTCTAGCTGCCGAAGGTCACCCCTCACAAGTGGGCTCCAAGTTCTTAAAAGACCTAAAGAATTTGATAGAAGAAGCAAGCGCTTCCAACGGTGGGAAGACAGTGATACTTCTCTCCCACAGCTTAGGAGGCCAATTTGTCCTCCAACTCCTAAATCGAAACCCCCCATCTTGGCGGCAAAAATTCATCAAACACTTCATTGCCCTTTCGGCTCCGTGGGGTGGTGCTATAGACGAAATGTTCACCTTTGCATCTGGCAACACTCTGGGAGTGCCCCTAGTGGACCCTTTACTAGTGAGGGGTGAACAAAGAAGCTCCGAGAGTAACCTTTGGCTTTTGCCCAACCCCAACATATTTGGTCCTCAAAAACCAATAGTGATCACTCCAAATAGGAATTACTCGGCGCATGACATGGTTGACTTTCTCAAAGACATTGGTTTTCCCGAAGGGGTTTATCCTTATGAAACTCGCATTCTACCCTTGATAGGGAACATACAAGCACCACAAGTGCCTATAACTTGTGTTACGGGGACGGGCGTGAGAACCTTAGAAACTTTGTTTTATGGGAACGGTGATTTTGATGAACGGCCAGAAATTTCATATGGGGATGGCGATGGAACGGTGAACATGGTGAGCTTGTTGGCGCTTCAGTCACTATGGAAAGACGAGAAAAATCAATACCTGAAAGTGATTAAGATAGGTGGGGTGTCGCATACTTCAATACTTAAAGATGAAGTTGCACTTAATGAAATCGTAGGGGAGgttagtaaaattaattctcATGCTGAGCTCGGTTCAAGCAATGTGTTTTCGGGGTAA 1272 0.4544 MLSLLCTCGASTGGNLHPLILIPGNGGNQLEARLTTQYKPSSFICESWYPFVKKKKGWFRLWFDSSVLLAPFTQCFAERMMLHYHPQLDDYFNTPGVQTRVRHFGSTHSLLYLNPRLKHITGYMAPLVDSLQQLGYVDGETLFGAPYDFRYGLAAEGHPSQVGSKFLKDLKNLIEEASASNGGKTVILLSHSLGGQFVLQLLNRNPPSWRQKFIKHFIALSAPWGGAIDEMFTFASGNTLGVPLVDPLLVRGEQRSSESNLWLLPNPNIFGPQKPIVITPNRNYSAHDMVDFLKDIGFPEGVYPYETRILPLIGNIQAPQVPITCVTGTGVRTLETLFYGNGDFDERPEISYGDGDGTVNMVSLLALQSLWKDEKNQYLKVIKIGGVSHTSILKDEVALNEIVGEVSKINSHAELGSSNVFSG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3687 423 Gene3D alpha/beta hydrolase 330 407 IPR029058 -
Ssu1g3687 423 SUPERFAMILY alpha/beta-Hydrolases 13 403 IPR029058 -
Ssu1g3687 423 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 14 408 - -
Ssu1g3687 423 Gene3D alpha/beta hydrolase 66 243 IPR029058 -
Ssu1g3687 423 Pfam Lecithin:cholesterol acyltransferase 59 295 IPR003386 GO:0006629|GO:0008374
Ssu1g3687 423 PANTHER LECITHIN:CHOLESTEROL ACYLTRANSFERASE FAMILY PROTEIN, EXPRESSED 14 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3687 Ssu-Chr1 92958395 92960800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3687 1 410 Acyl Lipid Metabolism Gene Families AT1G27480 61.985 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3687 - - gmx:100804027 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3687 1 92958395 92960800 Ssu1g3687 1 92958395 92960800 ECH