Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3684 ATGGACCTTCCGGTTCTCAGGAAGTGTCTCGAATTCTCTcgaagaaacaaaaattatcttctCCTGATTGCCTTGTTCGGAGCCTCCGGTTACGGTGCGTACAGGGCCTACAATTCGCCCTATGTGGCTCAGAAACGGCACCGTCTCGCGAATCTCCTCCGAGCCTTCGCTTCCGTCGCCGAGTTAATTTCCAATTCCGCAGACACCATCGCCGTTATCTCGAGCGACTTAAACCGATTCCTTACTTCCGAATCCGACGAAATCCCCAACAACTTGAAGCAGTTGTCGAAAATCGCAGCGTCGAAGGAGTTCTCAGCGTCGCTGGCTAGGGTTTCGGAGGCTGTCACGCGTGGGATTTTGCAAGGGTATAAATCACAGGCGGGTGACGATACTAACGGCAATGCTCCCTCGGAAATCACCGCGGAATGTTCTAGATTTTCGGATAGGGTGCTGGAGAAGCTTGTCTCGAAGGCTGGAACGGGTTTCGTGTCCGTTGTGGTTGGAAGCTTTGCGAGGAACTTGGTTTTGGGTTTCTTTGATGCTGATAAGGAAAATGCGCGGTCTCAATCGGATGTTCCTGGATGGGTGAACGTGATTTGCGATGAGAGGTGTGGGAAGCTTATAGGGGATTGTGTGCAACTCTTTGTGAGCACTGCGGTTGCTGTTTTTCTTGACAAGACAATGGATGTCAATACCTACGATGAAATGTTTGCCGGATTGTCGAATCCGAAGCACCAGGAGAAGGTGAAGGGGGTTTTGGTTGCTATGTGTAATGGTGCTGTCGAGACTTTTGTTAGAACTTCTCACCAGGTTATGACAAACCGGTCGAATTCGGGTTTATCTGTGTCTTCTGTTGTTCCGGTGAGTGATGATGGGTGCCTGAAACCGGAGGCGTTTCTGCAGCAACTCAGAATTGGTGGGGTTCAGGATGTTGGGTGGCTTGAACAGATTAAGTCAACGCTTTCAGTGCCGGCGAACCGGAGGTTCGTGCTTGATGTAACGGGGAGAGTGACGTTCGAAACGGTGAGGTCGTTCGTGGCATTTTTGTTATGGAGAATATCAGATGGATTCAAAGGGAGTGTTAGTAAGGTTCATGATAAGGTTGTGGACAAAGGAATGGAAGTGGTTAGATATGTTGGTGCTAAGTCATCGGTTATTCTTACCCTTTGTCTTGCTTTGTATTTGCATATTATGGGTGGTAGTAGGATTCTCTTGCCTGCTTAG 1224 0.4828 MDLPVLRKCLEFSRRNKNYLLLIALFGASGYGAYRAYNSPYVAQKRHRLANLLRAFASVAELISNSADTIAVISSDLNRFLTSESDEIPNNLKQLSKIAASKEFSASLARVSEAVTRGILQGYKSQAGDDTNGNAPSEITAECSRFSDRVLEKLVSKAGTGFVSVVVGSFARNLVLGFFDADKENARSQSDVPGWVNVICDERCGKLIGDCVQLFVSTAVAVFLDKTMDVNTYDEMFAGLSNPKHQEKVKGVLVAMCNGAVETFVRTSHQVMTNRSNSGLSVSSVVPVSDDGCLKPEAFLQQLRIGGVQDVGWLEQIKSTLSVPANRRFVLDVTGRVTFETVRSFVAFLLWRISDGFKGSVSKVHDKVVDKGMEVVRYVGAKSSVILTLCLALYLHIMGGSRILLPA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3684 407 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A10 1 406 - -
Ssu1g3684 407 PANTHER ZGC:172139 1 406 IPR019141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3684 Ssu-Chr1 92903004 92904227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3684 - - gmx:100810954 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3684 1 92903004 92904227 Ssu1g3684 1 92903004 92904227 ECH