Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3683 ATGCAAGCTAATTCCATGGCTGCCACTACCTCTTCTTCCAGCTGCAGCGGCTTCTTCAGTCTCCGATCACCAAACCCTGTCCGAGACTCCTCCTCGTCGGGCCAAGGCTCTTCCGGTTGCGGAAAGTTTGATGGGGTCGCCATGTGGTTCATCAACGGCGTCACGATGGCTTTCTTTGCGTCCTTAAATCGTTGCTCTTGCATTCGCATCGCCACCGAAGAAGACGGGGAGGACGCCAACGACGACATGCCGTTGATGCTCAACGACGGAAATCTCCGCCACGATGGCCTCGCTGCGGGCTCCGCCAGCAGGAGAAGGACCGGCAcagggaagaagaagagtgcAGCTGTTCTCGTCGACGAGGACTGA 369 0.5501 MQANSMAATTSSSSCSGFFSLRSPNPVRDSSSSGQGSSGCGKFDGVAMWFINGVTMAFFASLNRCSCIRIATEEDGEDANDDMPLMLNDGNLRHDGLAAGSASRRRTGTGKKKSAAVLVDED 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3683 122 MobiDBLite consensus disorder prediction 96 122 - -
Ssu1g3683 122 PANTHER PROTEIN, PUTATIVE-RELATED 6 113 - -
Ssu1g3683 122 PANTHER PROTEIN, PUTATIVE-RELATED 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3683 Ssu-Chr1 92873811 92874179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3683 - - gmx:100811492 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3683 1 92873811 92874179 Ssu1g3683 1 92873811 92874179 ECH
Ssu5g0346 5 7221021 7221323 Ssu1g3683 1 92873811 92874179 PCT