Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3660 ATGGGGAAAAGTAAGGTTGCAATCTTGTTGCTTTGGGTCTTGTTTGCATTGTGTATCAGATTGCACTTGAATAATGTTGAAGCAAGAGCATCATCAcctttagaaaaagaaatcgAAGCCAAATTGAAGCAACTCAACAAGCCTGCCGTGAAAACCATTAAGAGTGAAGATGGAGATATTATTGATTGCGTCAACATCTACGAGCAACCTGCTTTTGATCATCCAGCCTTAAAAGACCACACTATCAAgATGATGCCCGATTTTCTGCTAGAATCCCAAAATTCAAGCACAAAAGATGGTTCCGAGTCTCAGTCAGTGATATTTCAGACATGGCAGAAAAGTGGAAGTTGTCCAAAAGGAACCATCCCTATTCGCAGAATTCTAAAGGAGGACTTACTGAGAGCTGCTTCTCTTGACCGCTTTGGCCGAAAACCCCCTGCAGTATTTAAGAATTCAGCACATGGCTTCAACCTTAATTTCTCCAACCTCACTGCCGACAGTTCATTTATTCCAGAAAATCGCTCGTCATCATATCTTGTGACATTGGGATACAACTATATCGGTGCACAAACAGACATTAATGTTTGGAATCCAAGGGTTGACATGCCAGACGATTTCACCACAGCTCAAATCTGGCTTAAGAACAATAACAATCCCTATTTTGAAAGCGTTGAATCAGGCTGGATGGTGAATCCGAAGTTATATCGTGACAGAGCCACCAGGTTTTTTGCCTACTGGACCAGGGATTCATACAGGTCAACAGGTTGCTTTGATCTTACTTGCTGA 786 0.4097 MGKSKVAILLLWVLFALCIRLHLNNVEARASSPLEKEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYEQPAFDHPALKDHTIKMMPDFLLESQNSSTKDGSESQSVIFQTWQKSGSCPKGTIPIRRILKEDLLRAASLDRFGRKPPAVFKNSAHGFNLNFSNLTADSSFIPENRSSSYLVTLGYNYIGAQTDINVWNPRVDMPDDFTTAQIWLKNNNNPYFESVESGWMVNPKLYRDRATRFFAYWTRDSYRSTGCFDLTC 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3660 261 PANTHER ASLB (DUF239)-RELATED 13 261 - -
Ssu1g3660 261 Pfam Neprosin activation peptide 52 148 IPR025521 -
Ssu1g3660 261 Pfam Neprosin 204 261 IPR004314 -
Ssu1g3660 261 Gene3D - 191 261 - -
Ssu1g3660 261 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 13 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3660 Ssu-Chr1 92258136 92262360 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3660 - - gmx:100804570 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3660 1 92258136 92262360 Ssu1g3660 1 92258136 92262360 ECH