Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3655 ATGGACCGTTTTCCGATCCTCTTTCTCGTCGCCACCCTCATCACCCTCGTCTCCGGTGGCCGTGACGATATTCTCCGATTGCCATCCGAAGCTTCCAGGTTCTTCCAGGCACCCGCTGCCGATGAAAACGATGAGGGTACGAGGTGGGCCGTTTTAATTGCCGGTTCCAATGGCTACTGGAATTACAGGCATCAGTCTGATGTTTGCCATGCGTATCAACTACTAAGGAAAGGTGGTctgaaagaagaaaatattgttgtatttaTGTATGATGACATTGCTTTCAATGAAGAGAACCCGCGGCCTGGAGTCATCATTAACAGCCCACACGGAAATGATGTTTACAAAGGGGTCCCTAAGGATTATGTTGGTGAAGAAGTTACTGTTAACAACTTTTTTGCTTCTATACTTGGAAATAAGTCAGCTCTTACCGGTGGCAGTGGGAAGGTTGTGGATAGTGGTCCCAAtgatcatatatttatatactactCTGATCATGGGGGTCCGGGAGTGCTAGGGATGCCTACTAGTCCGTACATGTATGCATCCGATCTGATTGAAGTCTTGAAGAAGAAGCATGCTTCTGGAACTTATAAAAGCCTAGTATTTTATCTAGAGGCATGTGAATCGGGGAGCATCTTTGAAGGTCTTCTTCCTGAAGGTCTGAATATATATGCAACAACAGCTGCAAATGCAGAAGAAAGCAGTTGGGGAACGTATTGTCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATGAAACCTGCCTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGACACGCACAATTTGCGAACGGAAACTTTACATCAACAATACGAATTGGTCAAACAAAGAACTATGAATGGAAATTCAATCTATGGTTCCCATGTGATGCAGTATGGTGACATAAGGCTTAGCAAGAATAATCTCTTCCTATATTTGGGTACAAATCCTGctaatgataattttacttttgttgATGAAAACTCATTGGTGCCACCTTCAAAAGCAGTCAACCAACGTGATGCAGATCTCATCCATTTCTGGGATAAGTTCCGCAAAGCTCCTGTGGGTTCTTCTAGGAAAGCTGCAGCTGAGAAACAAATTCTGGAAGCAATGTCTCACAGAATGCATATAGACGACAGCATAAAACTTATTGGAAAGCTCTTATTTGGCATTGAAAAGGGTCCAGAAGTGCTTAGCAGTGTTAGACCTGCTGGGCAACCACTTGTTGATGACTGGGACTGCCTTAAAACACTGGTTAGGACTTTTGAGACACATTGTGGATCCCTGTCTCAGTATGGGATGAAACATATGAGGTCCTTTGCAAACTTCTGCAACGCTGGAATACAGAAAGAACAAATGGCTGAGGCCTCAGCACAAGCATGCGATAGTATCCCTGCAACTCCCTGGAGTACTCTGCACAGGGTTTCAGTGCATAATTCCTAG 1458 0.4335 MDRFPILFLVATLITLVSGGRDDILRLPSEASRFFQAPAADENDEGTRWAVLIAGSNGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGVIINSPHGNDVYKGVPKDYVGEEVTVNNFFASILGNKSALTGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPYMYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDTHNLRTETLHQQYELVKQRTMNGNSIYGSHVMQYGDIRLSKNNLFLYLGTNPANDNFTFVDENSLVPPSKAVNQRDADLIHFWDKFRKAPVGSSRKAAAEKQILEAMSHRMHIDDSIKLIGKLLFGIEKGPEVLSSVRPAGQPLVDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIQKEQMAEASAQACDSIPATPWSTLHRVSVHNS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3655 485 Pfam Peptidase C13 family 48 318 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PANTHER VACUOLAR-PROCESSING ENZYME 6 479 - -
Ssu1g3655 485 PIRSF AE 3 482 IPR043577 GO:0004197|GO:0051603
Ssu1g3655 485 Gene3D - 46 342 - -
Ssu1g3655 485 PRINTS Hemoglobinase (C13) cysteine protease signature 149 168 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PRINTS Hemoglobinase (C13) cysteine protease signature 198 214 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PRINTS Hemoglobinase (C13) cysteine protease signature 74 103 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PRINTS Hemoglobinase (C13) cysteine protease signature 121 136 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PRINTS Hemoglobinase (C13) cysteine protease signature 49 73 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PIRSF Legumain 2 482 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 PANTHER HEMOGLOBINASE FAMILY MEMBER 6 479 IPR001096 GO:0006508|GO:0008233
Ssu1g3655 485 Gene3D - 343 471 IPR046427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3655 Ssu-Chr1 92157765 92162542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3655 K01369 - gmx:100791675 919.842