Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3640 ATGGCCTCAGACGCACAGCCTCTGCTGGGTCTAACCCCAGAGGAATACGCTGAACTGGAAACCATCATCAACACGCACCACAAATTCGAGCATTCCCCCAACATCTGCAAGTCTATCATAGCGCAGCGCATCGACGCTCCGGCGCGCACGGTGTGGCCCTTGCTCCGAAGCTTCGAGAACCCGCAGAAGTACAAGCACTTCATCAAGAGCTGCCACATGCGGTCAGGGGACGGCGGCGTGGGCAGCGTCCGAGAGGTCACCATCGTCTCCGGCCTGCCCGCCTCCACCAGCACCGAGAGGCTCGAGATTCTCGACGACGACAGGCACCTCCTCAGCTTCCGCGTCGTCGGCGGCGAGCACAGGCTCCGCAACTACCGCTCCGTCACGTCGGTCAACGAGTTCAAGAGGGATGACGGTACGGTCTACACTATCGTGCTGGAATCTTACGTCGTCGACATACCCGAAGGGAATACGGGAGTGGATACGAAGATGTTTGTTGACACTGTCGTCAAGCTTAACCTTCAGAAACTCGGGGAGGTCGCTATGGCTACTATACGGCCCTGA 564 0.5869 MASDAQPLLGLTPEEYAELETIINTHHKFEHSPNICKSIIAQRIDAPARTVWPLLRSFENPQKYKHFIKSCHMRSGDGGVGSVREVTIVSGLPASTSTERLEILDDDRHLLSFRVVGGEHRLRNYRSVTSVNEFKRDDGTVYTIVLESYVVDIPEGNTGVDTKMFVDTVVKLNLQKLGEVAMATIRP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3640 187 Pfam Polyketide cyclase / dehydrase and lipid transport 42 179 IPR019587 -
Ssu1g3640 187 SUPERFAMILY Bet v1-like 36 182 - -
Ssu1g3640 187 PANTHER - 14 184 - -
Ssu1g3640 187 Gene3D - 2 187 IPR023393 -
Ssu1g3640 187 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 14 184 - -
Ssu1g3640 187 CDD PYR_PYL_RCAR_like 36 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3640 Ssu-Chr1 92017232 92017795 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3640 K14496 - gmx:100794619 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3640 1 92017232 92017795 Ssu1g3640 1 92017232 92017795 ECH